Yang Li
University of Michigan
H-index: 20
North America-United States
Top articles of Yang Li
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
Improving deep learning protein monomer and complex structure prediction using DeepMSA2 with huge metagenomics data | Nature Methods | Wei Zheng Qiqige Wuyun Yang Li Chengxin Zhang P Lydia Freddolino | 2024/1/2 |
Integrating end-to-end learning with deep geometrical potentials for ab initio RNA structure prediction | Nature Communications | Yang Li Chengxin Zhang Chenjie Feng Robin Pearce P Lydia Freddolino | 2023/9/16 |
Machine learning for protein inter-residue interaction prediction | Yang Li Yan Liu Dong-Jun Yu | 2023 | |
I-TASSER-MTD: a deep-learning-based platform for multi-domain protein structure and function prediction | Xiaogen Zhou Wei Zheng Yang Li Robin Pearce Chengxin Zhang | 2022/10 | |
Progressive assembly of multi-domain protein structures from cryo-EM density maps | Nature computational science | Xiaogen Zhou Yang Li Chengxin Zhang Wei Zheng Guijun Zhang | 2022/4 |
Fast and accurate Ab Initio Protein structure prediction using deep learning potentials | PLoS computational biology | Robin Pearce Yang Li Gilbert S Omenn Yang Zhang | 2022/9/16 |
DEMO2: Assemble multi-domain protein structures by coupling analogous template alignments with deep-learning inter-domain restraint prediction | Nucleic Acids Research | Xiaogen Zhou Chunxiang Peng Wei Zheng Yang Li Guijun Zhang | 2022/7/5 |
LOMETS3: Integrating deep learning and profile alignment for advanced protein template recognition and function annotation | Nucleic acids research | Wei Zheng Qiqige Wuyun Xiaogen Zhou Yang Li Peter L Freddolino | 2022/7/5 |
Deep learning geometrical potential for high-accuracy ab initio protein structure prediction | Iscience | Yang Li Chengxin Zhang Dong-Jun Yu Yang Zhang | 2022/6/17 |
Deducing high-accuracy protein contact-maps from a triplet of coevolutionary matrices through deep residual convolutional networks | PLoS computational biology | Yang Li Chengxin Zhang Eric W Bell Wei Zheng Xiaogen Zhou | 2021/3/26 |
Protein inter‐residue contact and distance prediction by coupling complementary coevolution features with deep residual networks in CASP14 | Proteins: Structure, Function, and Bioinformatics | Yang Li Chengxin Zhang Wei Zheng Xiaogen Zhou Eric W Bell | 2021/12 |
Protein structure prediction using deep learning distance and hydrogen‐bonding restraints in CASP14 | Proteins: Structure, Function, and Bioinformatics | Wei Zheng Yang Li Chengxin Zhang Xiaogen Zhou Robin Pearce | 2021/7/30 |
Improving fragment-based ab initio protein structure assembly using low-accuracy contact-map predictions | Nature communications | SM Mortuza Wei Zheng Chengxin Zhang Yang Li Robin Pearce | 2021/8/18 |
Folding non-homologous proteins by coupling deep-learning contact maps with I-TASSER assembly simulations | Cell reports methods | Wei Zheng Chengxin Zhang Yang Li Robin Pearce Eric W Bell | 2021/7/26 |
FUpred: detecting protein domains through deep-learning-based contact map prediction | Bioinformatics | Wei Zheng Xiaogen Zhou Qiqige Wuyun Robin Pearce Yang Li | 2020/6/15 |
SSCpred: single-sequence-based protein contact prediction using deep fully convolutional network | Journal of chemical information and modeling | Ming-Cai Chen Yang Li Yi-Heng Zhu Fang Ge Dong-Jun Yu | 2020/4/27 |
DeepMSA: constructing deep multiple sequence alignment to improve contact prediction and fold-recognition for distant-homology proteins | Bioinformatics | Chengxin Zhang Wei Zheng SM Mortuza Yang Li Yang Zhang | 2020/4/1 |
Co-Authors
