Tobias Marschall

About Tobias Marschall

Tobias Marschall, With an exceptional h-index of 45 and a recent h-index of 40 (since 2020), a distinguished researcher at Heinrich-Heine-Universität Düsseldorf, specializes in the field of Bioinformatics, Computational Genomics, Structural Variation, Genome Assembly.

His recent articles reflect a diverse array of research interests and contributions to the field:

Structural and genetic diversity in the secreted mucins, MUC5AC and MUC5B

SVarp: pangenome-based structural variant discovery

Phasing Diploid Genome Assembly Graphs with Single-Cell Strand Sequencing

Haplotype-resolved assembly of a tetraploid potato genome using long reads and low-depth offspring data

Long-read sequencing and structural variant characterization in 1,019 samples from the 1000 Genomes Project

Recombination between heterologous human acrocentric chromosomes

Allele detection using k-mer-based sequencing error profiles

Pan-conserved segment tags identify ultra-conserved sequences across assemblies in the human pangenome

Tobias Marschall Information

University

Position

___

Citations(all)

11985

Citations(since 2020)

10211

Cited By

4050

hIndex(all)

45

hIndex(since 2020)

40

i10Index(all)

79

i10Index(since 2020)

68

Email

University Profile Page

Heinrich-Heine-Universität Düsseldorf

Google Scholar

View Google Scholar Profile

Tobias Marschall Skills & Research Interests

Bioinformatics

Computational Genomics

Structural Variation

Genome Assembly

Top articles of Tobias Marschall

Title

Journal

Author(s)

Publication Date

Structural and genetic diversity in the secreted mucins, MUC5AC and MUC5B

bioRxiv

Elizabeth G Plender

Timofey Prodanov

PingHsun Hsieh

Evangelos Nizamis

William T Harvey

...

2024

SVarp: pangenome-based structural variant discovery

bioRxiv

Arda Soylev

Jana Ebler

Samarendra Pani

Tobias Rausch

Jan Korbel

...

2024

Phasing Diploid Genome Assembly Graphs with Single-Cell Strand Sequencing

bioRxiv

Mir Henglin

Maryam Ghareghani

William Harvey

David Porubsky

Sergey Koren

...

2024

Haplotype-resolved assembly of a tetraploid potato genome using long reads and low-depth offspring data

Genome Biology

Rebecca Serra Mari

Sven Schrinner

Richard Finkers

Freya Maria Rosemarie Ziegler

Paul Arens

...

2024/1/19

Long-read sequencing and structural variant characterization in 1,019 samples from the 1000 Genomes Project

bioRxiv

Siegfried Schloissnig

Samarendra Pani

Bernardo Rodriguez-Martin

Jana Ebler

Carsten Hain

...

2024

Recombination between heterologous human acrocentric chromosomes

Nature

Andrea Guarracino

Silvia Buonaiuto

Leonardo Gomes de Lima

Tamara Potapova

Arang Rhie

...

2023/5/11

Allele detection using k-mer-based sequencing error profiles

Bioinformatics Advances

Hufsah Ashraf

Jana Ebler

Tobias Marschall

2023/1/1

Pan-conserved segment tags identify ultra-conserved sequences across assemblies in the human pangenome

Cell Reports Methods

HoJoon Lee

Stephanie U Greer

Dmitri S Pavlichin

Bo Zhou

Alexander E Urban

...

2023/8/28

A draft human pangenome reference

Nature

Wen-Wei Liao

Mobin Asri

Jana Ebler

Daniel Doerr

Marina Haukness

...

2023/5/11

A comprehensive catalog of 3D genome organization in diverse human genomes facilitates understanding of the impact of structural variation on chromatin structure

bioRxiv

Chong Li

Marc Jan Bonder

Sabriya Syed

Human Genome Structural Variation Consortium (HGSVC)

HGSVC Functional Analysis Working Group

...

2023

Assembly of 43 human Y chromosomes reveals extensive complexity and variation

Nature

Pille Hallast

Peter Ebert

Mark Loftus

Feyza Yilmaz

Peter A Audano

...

2023/8/23

Pangenome graph construction from genome alignments with Minigraph-Cactus

Nature biotechnology

Glenn Hickey

Jean Monlong

Jana Ebler

Adam M Novak

Jordan M Eizenga

...

2023/5/10

PanPA: generation and alignment of panproteome graphs

Bioinformatics Advances

Fawaz Dabbaghie

Sanjay K Srikakulam

Tobias Marschall

Olga V Kalinina

2023/1/1

Optical genome mapping identifies novel recurrent structural alterations in childhood ETV6:: RUNX1+ and high hyperdiploid acute lymphoblastic leukemia

HemaSphere

Danielle Brandes

Layal Yasin

Karin Nebral

Jana Ebler

Dagmar Schinnerl

...

2023/8/1

Whole-genome long-read sequencing downsampling and its effect on variant-calling precision and recall

Genome Research

William T Harvey

Peter Ebert

Jana Ebler

Peter A Audano

Katherine M Munson

...

2023/12/1

Inversion polymorphism in a complete human genome assembly

Genome Biology

David Porubsky

William T Harvey

Allison N Rozanski

Jana Ebler

Wolfram Höps

...

2023/4/30

Functional analysis of structural variants in single cells using Strand-seq

Nature biotechnology

Hyobin Jeong

Karen Grimes

Kerstin K Rauwolf

Peter-Martin Bruch

Tobias Rausch

...

2023/6

Increased mutation and gene conversion within human segmental duplications

Nature

Mitchell R Vollger

Philip C Dishuck

William T Harvey

William S DeWitt

Xavi Guitart

...

2023/5/11

Constructing founder sets under allelic and non-allelic homologous recombination

Algorithms for Molecular Biology

Konstantinn Bonnet

Tobias Marschall

Daniel Doerr

2023/9/29

Gaps and complex structurally variant loci in phased genome assemblies

Genome research

David Porubsky

Mitchell R Vollger

William T Harvey

Allison N Rozanski

Peter Ebert

...

2023/4/1

See List of Professors in Tobias Marschall University(Heinrich-Heine-Universität Düsseldorf)

Co-Authors

H-index: 190
Evan Eichler

Evan Eichler

University of Washington

H-index: 73
Benedict Paten

Benedict Paten

University of California, Santa Cruz

H-index: 47
Kai Ye

Kai Ye

Xi'an Jiaotong University

H-index: 42
Sven Rahmann

Sven Rahmann

Universität Duisburg-Essen

H-index: 40
Gunnar W. Klau

Gunnar W. Klau

Heinrich-Heine-Universität Düsseldorf

H-index: 35
Mark Chaisson

Mark Chaisson

University of Southern California

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