Serghei Mangul
University of Southern California
H-index: 41
North America-United States
Top articles of Serghei Mangul
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
BioLLMBench: A Comprehensive Benchmarking of Large Language Models in Bioinformatics | Serghei Mangul Varuni Sarwal Viorel Munteanu Timur Suhodolschi Dumitru Ciorba | 2024/1/16 | |
Packaging and containerization of computational methods | Mohammed Alser Brendan Lawlor Richard J Abdill Sharon Waymost Ram Ayyala | 2024/4/2 | |
Early detection of emerging viral variants through analysis of community structure of coordinated substitution networks | Nature Communications | Fatemeh Mohebbi Alex Zelikovsky Serghei Mangul Gerardo Chowell Pavel Skums | 2024/4/2 |
The DNA methylation landscape across the TCR loci genes in patients with acute myeloid leukemia | Cancer Research | Mateusz Pospiech John Beckford Advaith M Kumar Mukund Tamizharasan Jaqueline Brito | 2024/3/22 |
The knowns and unknowns of long COVID-19: from mechanisms to therapeutical approaches | Roxana Gheorghita Iuliana Soldanescu Andrei Lobiuc Olga Adriana Caliman Sturdza Roxana Filip | 2024/3/4 | |
Large-scale integrative analysis of juvenile idiopathic arthritis for new insight into its pathogenesis | Arthritis Research & Therapy | Daeun Kim Jaeseung Song Nicholas Mancuso Serghei Mangul Junghyun Jung | 2024/2/10 |
Community structure and temporal dynamics of SARS-CoV-2 epistatic network allows for early detection of emerging variants with altered phenotypes | bioRxiv | Fatemeh Mohebbi Alex Zelikovsky Serghei Mangul Gerardo Chowell Pavel Skums | 2023 |
Meta-analysis of (single-cell method) benchmarks reveals the need for extensibility and interoperability | Genome Biology | Anthony Sonrel Almut Luetge Charlotte Soneson Izaskun Mallona Pierre-Luc Germain | 2023/5/17 |
Genomic reproducibility in the bioinformatics era | arXiv preprint arXiv:2308.09558 | Pelin Icer Baykal Paweł P Łabaj Florian Markowetz Lynn M Schriml Daniel J Stekhoven | 2023/8/18 |
SequenceLab: A Comprehensive Benchmark of Computational Methods for Comparing Genomic Sequences | arXiv preprint arXiv:2310.16908 | Maximilian-David Rumpf Mohammed Alser Arvid E Gollwitzer Joel Lindegger Nour Almadhoun | 2023/10/25 |
Developing bioinformatics capacity in Moldova | Viorel Munteanu Dumitru Ciorbă Victoria Popic Serghei Mangul | 2023 | |
Fasting-Mimicking Diet Inhibits Autophagy and Synergizes with Chemotherapy to Promote T-Cell-Dependent Leukemia-Free Survival | Cancers | Roberta Buono Jonathan Tucci Raffaello Cutri Novella Guidi Serghei Mangul | 2023/12/16 |
Analytical code sharing practices in biomedical research | bioRxiv | Nitesh Kumar Sharma Ram Ayyala Dhrithi Deshpande Yesha M Patel Viorel Munteanu | 2023/8/7 |
Whole blood transcriptomics identifies subclasses of pediatric septic shock | Critical Care | Jamie O Yang Matt S Zinter Matteo Pellegrini Man Yee Wong Kinisha Gala | 2023/12/8 |
Bioinformatics Research and Applications: 19th International Symposium, ISBRA 2023, Wrocław, Poland, October 9–12, 2023, Proceedings | Xuan Guo Serghei Mangul Murray Patterson Alexander Zelikovsky | 2023/10/7 | |
TAMPA: interpretable analysis and visualization of metagenomics-based taxon abundance profiles | GigaScience | Varuni Sarwal Jaqueline Brito Serghei Mangul David Koslicki | 2023 |
VISTA: An integrated framework for structural variant discovery | bioRxiv | Varuni Sarwal Seungmo Lee Jianzhi Yang Sriram Sankararaman Mark Chaisson | 2023 |
Rigorous benchmarking of T-cell receptor repertoire profiling methods for cancer RNA sequencing | Kerui Peng Theodore S Nowicki Katie Campbell Mohammad Vahed Dandan Peng | 2023/7 | |
A rigorous benchmarking of methods for SARS-CoV-2 lineage abundance estimation in wastewater | arXiv preprint arXiv:2309.16994 | Viorel Munteanu Victor Gordeev Justin Maine Su Khooshbu Kantibhai Patel Nicolae Drabcinski | 2023/9/29 |
Perceptual and technical barriers in sharing and formatting metadata accompanying omics studies | arXiv preprint arXiv:2401.02965 | Yu-Ning Huang Michael I Love Cynthia Flaire Ronkowski Dhrithi Deshpande Lynn M Schriml | 2023/11/22 |
Co-Authors
