Rui Jiang
Tsinghua University
H-index: 45
Asia-China
Top articles of Rui Jiang
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
collectNET: a web server for integrated inference of cell-cell communication network | bioRxiv | Yan Pan Zijing Gao Xuejian Cui Zhen Li Rui Jiang | 2024 |
Cofea: correlation-based feature selection for single-cell chromatin accessibility data | Briefings in Bioinformatics | Keyi Li Xiaoyang Chen Shuang Song Lin Hou Shengquan Chen | 2024/1/1 |
OpenAnnotateApi: Python and R packages to efficiently annotate and analyze chromatin accessibility of genomic regions | Bioinformatics Advances | Zijing Gao Rui Jiang Shengquan Chen | 2024/4/10 |
Detection of spatial chromatin accessibility patterns with inter-cellular correlations | bioRxiv | Xiaoyang Chen Keyi Li Xiaoqing Wu Zhen Li Qun Jiang | 2024/3/13 |
Accurate Annotation for Differentiating and Imbalanced Cell Types in Single-cell Chromatin Accessibility Data | IEEE/ACM Transactions on Computational Biology and Bioinformatics | Yuhang Jia Siyu Li Rui Jiang Shengquan Chen | 2024/3/5 |
Label Informed Contrastive Pretraining for Node Importance Estimation on Knowledge Graphs | IEEE Transactions on Neural Networks and Learning Systems | Tianyu Zhang Chengbin Hou Rui Jiang Xuegong Zhang Chenghu Zhou | 2024/2/21 |
ASTER: accurately estimating the number of cell types in single-cell chromatin accessibility data | Bioinformatics | Shengquan Chen Rongxiang Wang Wenxin Long Rui Jiang | 2023/1/1 |
The prognostic value of intraoperative HRV during anesthesia in patients presenting for non-cardiac surgery | BMC anesthesiology | Jiahe Niu Yonghao Lu Ruikun Xu Fang Fang Shikai Hong | 2023/5/9 |
uniHEART: An Ensemble Atlas of Cardiac Cells Provides Multifaceted Portraits of the Human Heart | Xuegong Zhang Yixin Chen Kui Hua Shuhuan Xu Renke You | 2023/8/3 | |
Improving artificial intelligence pipeline for liver malignancy diagnosis using ultrasound images and video frames | Briefings in Bioinformatics | Yiming Xu Bowen Zheng Xiaohong Liu Tao Wu Jinxiu Ju | 2023/1 |
NeuronMotif: Deciphering cis-regulatory codes by layer-wise demixing of deep neural networks | Proceedings of the National Academy of Sciences | Zheng Wei Kui Hua Lei Wei Shining Ma Rui Jiang | 2023/4/11 |
simCAS: an embedding-based method for simulating single-cell chromatin accessibility sequencing data | Bioinformatics | Chen Li Xiaoyang Chen Shengquan Chen Rui Jiang Xuegong Zhang | 2023/8/1 |
Deep generative modeling and clustering of single cell Hi-C data | Briefings in Bioinformatics | Qiao Liu Wanwen Zeng Wei Zhang Sicheng Wang Hongyang Chen | 2023/1 |
SINFONIA: scalable identification of spatially variable genes for deciphering spatial domains | Cells | Rui Jiang Zhen Li Yuhang Jia Siyu Li Shengquan Chen | 2023/2/13 |
EpiGePT: a Pretrained Transformer model for epigenomics | bioRxiv | Zijing Gao Qiao Liu Wanwen Zeng Wing Hung Wong Rui Jiang | 2023/7/18 |
scIBD: a self-supervised iterative-optimizing model for boosting the detection of heterotypic doublets in single-cell chromatin accessibility data | Genome Biology | Wenhao Zhang Rui Jiang Shengquan Chen Ying Wang | 2023/10/9 |
HiChIPdb: a comprehensive database of HiChIP regulatory interactions | Nucleic acids research | Wanwen Zeng Qiao Liu Qijin Yin Rui Jiang Wing Hung Wong | 2023/1/6 |
Building digital life systems for future biology and medicine | Quantitative Biology | Xuegong Zhang Lei Wei Rui Jiang Xiaowo Wang Jin Gu | 2023/9 |
A Phytophthora infestans RXLR effector AVR8 suppresses plant immunity by targeting a desumoylating isopeptidase DeSI2 | The Plant Journal | Rui Jiang Qin He Jingyi Song Zeng Liu Jian Yu | 2023/7 |
scEpiTools: a database to comprehensively interrogate analytic tools for single-cell epigenomic data | bioRxiv | Zijing Gao Xiaoyang Chen Zhen Li Xuejian Cui Shengquan Chen | 2023 |
Co-Authors
