Paul Babitzke
Penn State University
H-index: 59
North America-United States
Top articles of Paul Babitzke
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
A new reagent for in vivo structure probing of RNA G and U residues that improves RNA structure prediction alone and combined with DMS | RNA | Catherine A Douds Paul Babitzke Philip Bevilacqua | 2024/4/26 |
Multitier regulation of the E. coli extreme acid stress response by CsrA | Journal of Bacteriology | Mark G Gorelik Helen Yakhnin Archana Pannuri Alyssa C Walker Christine Pourciau | 2024/2/6 |
CsrA coordinates the expression of ribosome hibernation and anti-σ factor proteins | Mbio | Christine Pourciau Helen Yakhnin Archanna Pannuri Mark G Gorelik Ying-Jung Lai | 2023/12/19 |
Robust regulation of transcription pausing in Escherichia coli by the ubiquitous elongation factor NusG | Proceedings of the National Academy of Sciences | Alexander V Yakhnin Mikhail Bubunenko Zachary F Mandell Lucyna Lubkowska Sara Husher | 2023/6/13 |
In vivo-like nearest neighbor parameters improve prediction of fractional RNA base-pairing in cells<?mode OneColumn?> | Nucleic acids research | Jacob P Sieg Elizabeth A Jolley Melanie J Huot Paul Babitzke Philip C Bevilacqua | 2023/11/10 |
Allosteric mechanism of transcription inhibition by NusG-dependent pausing of RNA polymerase | Proceedings of the National Academy of Sciences | Rishi K Vishwakarma M Zuhaib Qayyum Paul Babitzke Katsuhiko S Murakami | 2023/2/14 |
Transcriptome-wide probing reveals RNA thermometers that regulate translation of glycerol permease genes in Bacillus subtilis | RNA | Elizabeth A Jolley Helen Yakhnin David C Tack Paul Babitzke Philip C Bevilacqua | 2023/9/1 |
CsrA Positively and Directly Regulates the Expression of the pdu, pocR, and eut Genes Required for the Luminal Replication of Salmonella Typhimurium | Microbiology Spectrum | Jessica Nava-Galeana Helen Yakhnin Paul Babitzke Víctor H Bustamante | 2023/8/17 |
CsrA-Mediated Translational Activation of the hmsE mRNA Enhances HmsD-Dependent C-di-GMP-Enabled Biofilm Production in Yersinia pestis | Journal of bacteriology | Amelia R Silva-Rohwer Kiara Held Helen Yakhnin Paul Babitzke Viveka Vadyvaloo | 2023/6/27 |
Transcriptome-wide effects of NusA on RNA polymerase pausing in Bacillus subtilis | Journal of bacteriology | Oshadhi T Jayasinghe Zachary F Mandell Alexander V Yakhnin Mikhail Kashlev Paul Babitzke | 2022/5/17 |
Analysis of mRNA decay intermediates in Bacillus subtilis 3′ exoribonuclease and RNA helicase mutant strains | Mbio | Shivani Chhabra Zachary F Mandell Bo Liu Paul Babitzke David H Bechhofer | 2022/4/26 |
Comprehensive transcription terminator atlas for Bacillus subtilis | Nature microbiology | Zachary F Mandell Rishi K Vishwakarma Helen Yakhnin Katsuhiko S Murakami Mikhail Kashlev | 2022/11 |
CsrA regulation via binding to the base‐pairing small RNA Spot 42 | Molecular microbiology | Ying‐Jung Lai Helen Yakhnin Archana Pannuri Christine Pourciau Paul Babitzke | 2022/1 |
Factor-stimulated intrinsic termination: getting by with a little help from some friends | Zachary F Mandell Dani Zemba Paul Babitzke | 2022/10/20 | |
Toeprint Assays for Detecting RNA Structure and Protein–RNA Interactions | Helen Yakhnin Paul Babitzke | 2022/8/4 | |
Expression of Bacillus subtilis ABCF antibiotic resistance factor VmlR is regulated by RNA polymerase pausing, transcription attenuation, translation attenuation … | Nucleic Acids Research | Hiraku Takada Zachary F Mandell Helen Yakhnin Anastasiya Glazyrina Shinobu Chiba | 2022/6/24 |
An incoherent feedforward loop formed by SirA/BarA, HilE and HilD is involved in controlling the growth cost of virulence factor expression by Salmonella Typhimurium | PLoS pathogens | Deyanira Pérez-Morales Jessica Nava-Galeana Roberto Rosales-Reyes Paige Teehan Helen Yakhnin | 2021/5/28 |
NusG is an intrinsic transcription termination factor that stimulates motility and coordinates gene expression with NusA | Elife | Zachary F Mandell Reid T Oshiro Alexander V Yakhnin Rishi Vishwakarma Mikhail Kashlev | 2021/4/9 |
NusG-dependent RNA polymerase pausing is a frequent function of this universally conserved transcription elongation factor | Alexander V Yakhnin Mikhail Kashlev Paul Babitzke | 2020/11/1 | |
Diverse mechanisms and circuitry for global regulation by the RNA-binding protein CsrA | Christine Pourciau Ying-Jung Lai Mark Gorelik Paul Babitzke Tony Romeo | 2020/10/27 |
Co-Authors
