Philip Bevilacqua
Penn State University
H-index: 64
North America-United States
Top articles of Philip Bevilacqua
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
Single-cell probing of RNA structure | Nature Methods | Elizabeth A Jolley Philip C Bevilacqua | 2024/2/6 |
The Presence of In Vivo Metabolites Decreases the Rate of RNA Duplex Formation and Increases the Rate of Duplex Dissociation | Kelley Melanson Elizabeth A Jolley Philip Bevilacqua | 2024 | |
A new reagent for in vivo structure probing of RNA G and U residues that improves RNA structure prediction alone and combined with DMS | RNA | Catherine A Douds Paul Babitzke Philip Bevilacqua | 2024/4/26 |
The Functional RNA Identification (FRID) Pipeline: Identification of Potential Pseudoknot-Containing RNA Elements as Therapeutic Targets for SARS-CoV-2 | bioRxiv | Peter C Forstmeier McCauley O Meyer Philip C Bevilacqua | 2023 |
RNA folding studies inside peptide-rich droplets reveal roles of modified nucleosides at the origin of life | Science Advances | McCauley O Meyer Ryota Yamagami Saehyun Choi Christine D Keating Philip C Bevilacqua | 2023/9/20 |
Transcriptome-wide probing reveals RNA thermometers that regulate translation of glycerol permease genes in Bacillus subtilis | RNA | Elizabeth A Jolley Helen Yakhnin David C Tack Paul Babitzke Philip C Bevilacqua | 2023/9/1 |
Structure-seq of tRNAs and other short RNAs in droplets and in vivo. | Methods in Enzymology | MO Meyer Saehyun Choi Christine D Keating Philip C Bevilacqua Ryota Yamagami | 2023/6/27 |
Flanking Sequence Cotranscriptionally Regulates Twister Ribozyme Activity | Biochemistry | Lauren N McKinley Reuben G Kern Sarah M Assmann Philip C Bevilacqua | 2023/12/22 |
MeltR software provides facile determination of nucleic acid thermodynamics | Biophysical Reports | Jacob P Sieg Sebastian J Arteaga Brent M Znosko Philip C Bevilacqua | 2023/6/14 |
In vivo-like nearest neighbor parameters improve prediction of fractional RNA base-pairing in cells<?mode OneColumn?> | Nucleic acids research | Jacob P Sieg Elizabeth A Jolley Melanie J Huot Paul Babitzke Philip C Bevilacqua | 2023/11/10 |
Rock, scissors, paper: How RNA structure informs function | Sarah M Assmann Hong-Li Chou Philip C Bevilacqua | 2023/6 | |
In vivo structure probing of RNA in Archaea: Novel insights into the ribosome structure of Methanosarcina acetivorans | RNA | Allison M Williams Elizabeth A Jolley Michel Geovanni Santiago-Martínez Cheong Xin Chan Robin R Gutell | 2023/10/1 |
Genome-wide analysis of the in vivo tRNA structurome reveals RNA structural and modification dynamics under heat stress | Proceedings of the National Academy of Sciences | Ryota Yamagami Jacob P Sieg Sarah M Assmann Philip C Bevilacqua | 2022/6/21 |
The metabolome weakens RNA thermodynamic stability and strengthens RNA chemical stability | Biochemistry | Jacob P Sieg Lauren N McKinley Melanie J Huot Neela H Yennawar Philip C Bevilacqua | 2022/10/28 |
Nucleotide-level investigations of RNA folding in molecular condensates | The Astrobiology Science Conference (AbSciCon) 2022 | McCauley Meyer Saehyun Choi Ryota Yamagami Christine Keating Philip Bevilacqua | 2022/5 |
Phase-specific RNA accumulation and duplex thermodynamics in multiphase coacervate models for membraneless organelles | Nature Chemistry | Saehyun Choi McCauley O Meyer Philip C Bevilacqua Christine D Keating | 2022/10 |
Experimental demonstration and pan-structurome prediction of climate-associated riboSNitches in Arabidopsis | Genome biology | Ángel Ferrero-Serrano Megan M Sylvia Peter C Forstmeier Andrew J Olson Doreen Ware | 2022/4/19 |
Upstream flanking sequence assists folding of an RNA thermometer | Journal of molecular biology | Elizabeth A Jolley Kathryn M Bormes Philip C Bevilacqua | 2022/9/30 |
Data for tRNA Structure-seq paper | Ryota Yamagami Philip Bevilacqua | 2022 | |
Regulatory mechanisms through RNA conformational switching and dynamics | Journal of molecular biology | Philip C Bevilacqua Blanton S Tolbert | 2022/9/9 |
Co-Authors
