Liang Huang

Liang Huang

Oregon State University

H-index: 38

North America-United States

About Liang Huang

Liang Huang, With an exceptional h-index of 38 and a recent h-index of 28 (since 2020), a distinguished researcher at Oregon State University, specializes in the field of Computational Linguistics, Computational Biology, Algorithms, RNA Folding, RNA Design.

His recent articles reflect a diverse array of research interests and contributions to the field:

Undesignable RNA Structure Identification via Rival Structure Generation and Structure Decomposition

LinearCoFold and LinearCoPartition: Linear-Time Algorithms for Secondary Structure Prediction of Interacting RNA molecules

RNA design via structure-aware multifrontier ensemble optimization

GIANT: Protein-Ligand Binding Affinity Prediction via Geometry-aware Interactive Graph Neural Network

A CRISPR-Cas9 mutation in sox9b long intergenic noncoding RNA (slincR) affects zebrafish development, behavior, and regeneration

Algorithm for optimized mRNA design improves stability and immunogenicity (LinearDesign)

Generation and functional analysis of defective viral genomes during SARS-CoV-2 infection

LinearSankoff: Linear-time Simultaneous Folding and Alignment of RNA Homologs

Liang Huang Information

University

Position

Assoc. Prof. ; Distinguished Scientist Baidu Research USA

Citations(all)

6353

Citations(since 2020)

2975

Cited By

4390

hIndex(all)

38

hIndex(since 2020)

28

i10Index(all)

80

i10Index(since 2020)

59

Email

University Profile Page

Oregon State University

Google Scholar

View Google Scholar Profile

Liang Huang Skills & Research Interests

Computational Linguistics

Computational Biology

Algorithms

RNA Folding

RNA Design

Top articles of Liang Huang

Title

Journal

Author(s)

Publication Date

Undesignable RNA Structure Identification via Rival Structure Generation and Structure Decomposition

Tianshuo Zhou

Wei Yu Tang

David H Mathews

Liang Huang

2024

LinearCoFold and LinearCoPartition: Linear-Time Algorithms for Secondary Structure Prediction of Interacting RNA molecules

Nucleic Acids Research.

He Zhang

Sizhen Li

Ning Dai

Liang Zhang

David H Mathews

...

2023/7

RNA design via structure-aware multifrontier ensemble optimization

ISMB 2023; Bioinformatics

Tianshuo Zhou

Ning Dai

Sizhen Li

Max Ward

David H Mathews

...

2023/6/1

GIANT: Protein-Ligand Binding Affinity Prediction via Geometry-aware Interactive Graph Neural Network

IEEE Transactions on Knowledge and Data Engineering

Shuangli Li

Jingbo Zhou

Tong Xu

Liang Huang

Fan Wang

...

2023/9/13

A CRISPR-Cas9 mutation in sox9b long intergenic noncoding RNA (slincR) affects zebrafish development, behavior, and regeneration

Toxicological Sciences

Subham Dasgupta

Jane K LaDu

Gloria R Garcia

Sizhen Li

...

...

2023/5/23

Algorithm for optimized mRNA design improves stability and immunogenicity (LinearDesign)

Nature

He Zhang

Liang Zhang

Ang Lin

Congcong Xu

...

...

2023/9

Generation and functional analysis of defective viral genomes during SARS-CoV-2 infection

Mbio

Terry Zhou

Nora J Gilliam

Sizhen Li

...

David H Mathews

...

2023/4/19

LinearSankoff: Linear-time Simultaneous Folding and Alignment of RNA Homologs

arXiv preprint arXiv:2307.09580

Sizhen Li

Ning Dai

He Zhang

Apoorv Malik

David H Mathews

...

2023/7/18

Improving the Circularization Efficiency, Stability and Translatability of Circular RNA by circDesign

bioRxiv

Congcong Xu

Liang Zhang

Weiyun Wang

...

Haifa Shen

...

2023/7/10

Systems and methods for sequence design

2022/8/25

Linear-Time Algorithms for RNA Structure Prediction

He Zhang

Liang Zhang

Kaibo Liu

Sizhen Li

David H Mathews

...

2022/7/11

LinearAlifold: Linear-Time Consensus Structure Prediction for RNA Alignments

arXiv preprint arXiv:2206.14794

Liang Zhang

Sizhen Li

He Zhang

David H Mathews

Liang Huang

2022/6/29

PaddleSpeech: An Easy-to-Use All-in-One Speech Toolkit

NAACL-2022 Demo Track (Best Demo Award)

Hui Zhang

Tian Yuan

Junkun Chen

Xintong Li

Renjie Zheng

...

2022/5/20

AT: Alignment-Aware Acoustic and Text Pretraining for Speech Synthesis and Editing

He Bai

Renjie Zheng

Junkun Chen

Xintong Li

Mingbo Ma

...

2022/3/18

LazySampling and LinearSampling: Fast Stochastic Sampling of RNA Secondary Structure with Applications to SARS-CoV-2

Nucleic Acids Research. https://academic.oup.com/nar/advance-article/doi/10.1093/nar/gkac1029/6833303

He Zhang

Liang Zhang

Sizhen Li

David H Mathews

Liang Huang

2022/10

LinearTurboFold: Linear-Time Global Prediction of Conserved Structures for RNA Homologs with Applications to SARS-CoV-2

Proceedings of the National Academy of Sciences (PNAS). https://www.pnas.org/content/pnas/118/52/e2116269118.full.pdf

Sizhen Li

He Zhang

Liang Zhang

Kaibo Liu

Boxiang Liu

...

2021/12

Structure-aware Interactive Graph Neural Networks for the Prediction of Protein-Ligand Binding Affinity

Proceedings of KDD 2021

Shuangli Li

Jingbo Zhou

Tong Xu

Liang Huang

Fan Wang

...

2021/7/21

Fused Acoustic and Text Encoding for Multimodal Bilingual Pretraining and Speech Translation

Renjie Zheng

Junkun Chen

Mingbo Ma

Liang Huang

2021/7/10

Improving Simultaneous Translation by Incorporating Pseudo-References with Fewer Reorderings

EMNLP 2021

Junkun Chen

Renjie Zheng

Atsuhito Kita

Mingbo Ma

Liang Huang

2020/10/21

Direct Simultaneous Speech-to-Text Translation Assisted by Synchronized Streaming ASR

Proceedings of ACL 2021: Findings

Junkun Chen

Mingbo Ma

Renjie Zheng

Liang Huang

2021/7

See List of Professors in Liang Huang University(Oregon State University)

Co-Authors

H-index: 62
David H. Mathews

David H. Mathews

University of Rochester

H-index: 45
Daniel Gildea

Daniel Gildea

University of Rochester

H-index: 35
David Chiang

David Chiang

University of Notre Dame

H-index: 25
Boxiang Liu

Boxiang Liu

Stanford University

H-index: 11
Junkun Chen

Junkun Chen

Oregon State University

academic-engine