Boxiang Liu

Boxiang Liu

Stanford University

H-index: 25

North America-United States

About Boxiang Liu

Boxiang Liu, With an exceptional h-index of 25 and a recent h-index of 25 (since 2020), a distinguished researcher at Stanford University, specializes in the field of Bioinformatics, Genomics, Machine Learning.

His recent articles reflect a diverse array of research interests and contributions to the field:

Algorithm for optimized mRNA design improves stability and immunogenicity

Molecular mechanisms of coronary artery disease risk at the PDGFD locus

Pantothenate kinase 2 interacts with PINK1 to regulate mitochondrial quality control via acetyl-CoA metabolism

Analysis and visualization of spatial transcriptomic data

Exploiting the GTEx resources to decipher the mechanisms at GWAS loci

Lineardesign: Efficient algorithms for optimized mrna sequence design

Comprehensive RNA analysis of CSF reveals a role for CEACAM6 in lung cancer leptomeningeal metastases

LinearTurboFold: linear-time global prediction of conserved structures for RNA homologs with applications to SARS-CoV-2

Boxiang Liu Information

University

Position

Baidu Research (previously)

Citations(all)

7795

Citations(since 2020)

7034

Cited By

3148

hIndex(all)

25

hIndex(since 2020)

25

i10Index(all)

38

i10Index(since 2020)

37

Email

University Profile Page

Stanford University

Google Scholar

View Google Scholar Profile

Boxiang Liu Skills & Research Interests

Bioinformatics

Genomics

Machine Learning

Top articles of Boxiang Liu

Title

Journal

Author(s)

Publication Date

Algorithm for optimized mRNA design improves stability and immunogenicity

Nature

He Zhang

Liang Zhang

Ang Lin

Congcong Xu

...

...

2023/9

Molecular mechanisms of coronary artery disease risk at the PDGFD locus

Nature Communications

Hyun-Jung Kim

Paul Cheng

Stanislao Travisano

Chad Weldy

João P Monteiro

...

2023/2/15

Pantothenate kinase 2 interacts with PINK1 to regulate mitochondrial quality control via acetyl-CoA metabolism

Nature communications

Yunpeng Huang

Zhihui Wan

Yinglu Tang

Junxuan Xu

Bretton Laboret

...

2022/5/3

Analysis and visualization of spatial transcriptomic data

Boxiang Liu

Yanjun Li

Liang Zhang

2022/1/27

Exploiting the GTEx resources to decipher the mechanisms at GWAS loci

Genome biology

Alvaro N Barbeira

Rodrigo Bonazzola

Eric R Gamazon

Yanyu Liang

YoSon Park

...

2021/12

Lineardesign: Efficient algorithms for optimized mrna sequence design

He Zhang

Liang Zhang

Ang Lin

Congcong Xu

Ziyu Li

...

2021/10/11

Comprehensive RNA analysis of CSF reveals a role for CEACAM6 in lung cancer leptomeningeal metastases

NPJ Precision Oncology

Yingmei Li

Dina Polyak

Layton Lamsam

Ian David Connolly

Eli Johnson

...

2021/10/8

LinearTurboFold: linear-time global prediction of conserved structures for RNA homologs with applications to SARS-CoV-2

Proceedings of the National Academy of Sciences (PNAS). https://www.pnas.org/content/pnas/118/52/e2116269118.full.pdf

Sizhen Li

He Zhang

Liang Zhang

Kaibo Liu

Boxiang Liu

...

2021/12

ParaMed: a parallel corpus for English–Chinese translation in the biomedical domain

BMC Medical Informatics and Decision Making

Boxiang Liu

Liang Huang

2021/9

Acronyms and opportunities for improving deep nets

Frontiers in Artificial Intelligence

Kenneth Church

Boxiang Liu

2021/12/13

Better than BERT but worse than baseline

arXiv preprint arXiv:2105.05915

Boxiang Liu

Jiaji Huang

Xingyu Cai

Kenneth Church

2021/5/12

SSPF: a Simple and Scalable Parameter Free Clustering Method

Xingyu Cai

Yuchen Bian

Jiaji Huang

Boxiang Liu

Jiahong Yuan

...

2021/12/7

Studies on the Property and Application of Starch Sugar Ester Dodecenylsuccinic

Liu Zhongdong

Liu Boxiang

Wei Guohua

Zhu Xin

Wang Huabin

2020/3/11

Molecular mechanisms of coronary disease revealed using quantitative trait loci for TCF21 binding, chromatin accessibility, and chromosomal looping

Genome biology

Quanyi Zhao

Michael Dacre

Trieu Nguyen

Milos Pjanic

Boxiang Liu

...

2020/12

Single-cell epigenomic analyses implicate candidate causal variants at inherited risk loci for Alzheimer’s and Parkinson’s diseases

Nature genetics

M Ryan Corces

Anna Shcherbina

Soumya Kundu

Michael J Gloudemans

Laure Frésard

...

2020/11

Imputation of single‐cell gene expression with an autoencoder neural network

Quantitative Biology

Md Bahadur Badsha

Rui Li

Boxiang Liu

Yang I Li

Min Xian

...

2020/3

CoV-Seq, a new tool for SARS-CoV-2 genome analysis and visualization: Development and usability study

Journal of medical Internet research

Boxiang Liu

Kaibo Liu

He Zhang

Liang Zhang

Yuchen Bian

...

2020/10/2

Quantitative trait loci mapped for TCF21 binding, chromatin accessibility and chromosomal looping in coronary artery smooth muscle cells reveal molecular mechanisms of coronary …

bioRxiv

Quanyi Zhao

Michael Dacre

Trieu Nguyen

Milos Pjanic

Boxiang Liu

...

2020/2/4

NEJM-enzh: A parallel corpus for English-Chinese translation in the biomedical domain

arXiv preprint arXiv:2005.09133

Boxiang Liu

Liang Huang

2020/5/18

LinearTurboFold: Linear-Time RNA Structural Alignment and Conserved Structure Prediction with Applications to Coronaviruses

Sizhen Li

He Zhang

Liang Zhang

Kaibo Liu

Boxiang Liu

...

2020

See List of Professors in Boxiang Liu University(Stanford University)

Co-Authors

H-index: 112
Thomas Quertermous

Thomas Quertermous

Stanford University

H-index: 74
Stephen B Montgomery

Stephen B Montgomery

Stanford University

H-index: 41
Ira M Hall

Ira M Hall

Yale University

H-index: 35
Clint L Miller

Clint L Miller

University of Virginia

H-index: 28
Colby Chiang

Colby Chiang

Harvard University

H-index: 20
Abhiram Rao

Abhiram Rao

Stanford University

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