Kushal K Dey
Harvard University
H-index: 21
North America-United States
Top articles of Kushal K Dey
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
Tissue-specific enhancer–gene maps from multimodal single-cell data identify causal disease alleles | Nature Genetics | Saori Sakaue Kathryn Weinand Shakson Isaac Kushal K Dey Karthik Jagadeesh | 2024/4/9 |
Single-cell multi-ome regression models identify functional and disease-associated enhancers and enable chromatin potential analysis | Nature Genetics | Sneha Mitra Rohan Malik Wilfred Wong Afsana Rahman Alexander J Hartemink | 2024/3/21 |
Leveraging single-cell ATAC-seq and RNA-seq to identify disease-critical fetal and adult brain cell types | Nature Communications | Samuel S Kim Buu Truong Karthik Jagadeesh Kushal K Dey Amber Z Shen | 2024/1/17 |
CRISPR Screening Uncovers a Long-Range Enhancer for ONECUT1 in Pancreatic Differentiation and Links a Diabetes Risk Variant | bioRxiv | Samuel Joseph Kaplan Wilfred Wong Jielin Yan Julian Pulecio Hyein Cho | 2024 |
Systematically characterizing the roles of E3-ligase family members in inflammatory responses with massively parallel Perturb-seq | bioRxiv | Kathryn Geiger-Schuller Basak Eraslan Olena Kuksenko Kushal K Dey Karthik A Jagadeesh | 2023/1/24 |
An encyclopedia of enhancer-gene regulatory interactions in the human genome | bioRxiv | Andreas R Gschwind Kristy S Mualim Alireza Karbalayghareh Maya U Sheth Kushal K Dey | 2023/11/13 |
Compressed Perturb-seq: highly efficient screens for regulatory circuits using random composite perturbations | BioRxiv | Douglas Yao Loic Binan Jon Bezney Brooke Simonton Jahanara Freedman | 2023/1/23 |
Scalable genetic screening for regulatory circuits using compressed Perturb-seq | Nature Biotechnology | Douglas Yao Loic Binan Jon Bezney Brooke Simonton Jahanara Freedman | 2023/10/23 |
The Impact of Genomic Variation on Function (IGVF) Consortium | arXiv preprint arXiv:2307.13708 | IGVF Consortium | 2023/7/24 |
Rare-variant genetic architecture | Nature Genetics | Wei Li | 2023/3 |
Polygenic architecture of rare coding variation across 394,783 exomes | Nature | Daniel J Weiner Ajay Nadig Karthik A Jagadeesh Kushal K Dey Benjamin M Neale | 2023/2/16 |
Mapping the dynamic genetic regulatory architecture of HLA genes at single-cell resolution | Nature genetics | Joyce B Kang Amber Z Shen Saisriram Gurajala Aparna Nathan Laurie Rumker | 2023/12 |
Polygenic enrichment distinguishes disease associations of individual cells in single-cell RNA-seq data | Nature genetics | Martin Jinye Zhang Kangcheng Hou Kushal K Dey Saori Sakaue Karthik A Jagadeesh | 2022/10 |
SNP-to-gene linking strategies reveal contributions of enhancer-related and candidate master-regulator genes to autoimmune disease | Cell genomics | Kushal K Dey Steven Gazal Bryce van de Geijn Samuel Sungil Kim Joseph Nasser | 2022/7/13 |
Linking disease-associated genetic variants to cell types and processes | Kirsty Minton | 2022/12 | |
One step closer to linking GWAS SNPs with the right genes | Nature Genetics | Guillaume Lettre | 2022/6 |
SAIGE-GENE+ improves the efficiency and accuracy of set-based rare variant association tests (vol 54, pg 1446, 2022) | Nature genetics | Wei Zhou Wenjian Bi Zhangchen Zhao Kushal K Dey Karthik A Jagadeesh | 2022/10 |
Single-cell RNA-seq relates GWAS variants to disease risk | Nature Biotechnology | Anne Dörr | 2022/11 |
Combining SNP-to-gene linking strategies to identify disease genes and assess disease omnigenicity | Nature genetics | Steven Gazal Omer Weissbrod Farhad Hormozdiari Kushal K Dey Joseph Nasser | 2022/6 |
Identifying disease-critical cell types and cellular processes by integrating single-cell RNA-sequencing and human genetics | Nature genetics | Karthik A Jagadeesh Kushal K Dey Daniel T Montoro Rahul Mohan Steven Gazal | 2022/10 |
Co-Authors
