Matthew Stephens
University of Chicago
H-index: 88
North America-United States
Top articles of Matthew Stephens
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
Adjusting for genetic confounders in transcriptome-wide association studies improves discovery of risk genes of complex traits | Nature Genetics | Siming Zhao Wesley Crouse Sheng Qian Kaixuan Luo Matthew Stephens | 2024/1/26 |
A pairwise cytokine code explains the organism-wide response to sepsis | Nature Immunology | Michihiro Takahama Ashwini Patil Gabriella Richey Denis Cipurko Katherine Johnson | 2024/1/8 |
Accelerated dimensionality reduction of single-cell RNA sequencing data with fastglmpca | bioRxiv | Eric Weine Peter Carbonetto Matthew Stephens | 2024 |
Fast and flexible joint fine-mapping of multiple traits via the Sum of Single Effects model | bioRxiv | Yuxin Zou Peter Carbonetto Dongyue Xie Gao Wang Matthew Stephens | 2023/4/14 |
Dissecting tumor transcriptional heterogeneity from single-cell RNA-seq data by generalized binary covariance decomposition | bioRxiv | Yusha Liu Peter Carbonetto Jason Willwerscheid Scott A Oakes Kay F Macleod | 2023/8/17 |
Package ‘varbvs’ | Peter Carbonetto Matthew Stephens David Gerard | 2023/5/31 | |
GoM DE: interpreting structure in sequence count data with differential expression analysis allowing for grades of membership | Genome Biology | Peter Carbonetto Kaixuan Luo Abhishek Sarkar Anthony Hung Karl Tayeb | 2023/10/19 |
Concept Environmental and Social Review Summary (ESRS)-Regional Policy Dialogue and Knowledge Exchange on Development Responses to Forced Displacement in the Horn of Africa-P180799 | Lorena Vinuela | 2023/9/20 | |
Organism-Wide Analysis of Sepsis Reveals Mechanisms of Systemic Inflammation | bioRxiv | Michihiro Takahama Ashwini Patil Katherine Johnson Denis Cipurko Yoshimi Miki | 2023/2/2 |
The Bayesian lens and Bayesian blinkers | Matthew Stephens | 2023/5/15 | |
Methods and materials for canine breed identification | 2023/9/7 | ||
A flexible empirical Bayes approach to multivariate multiple regression, and its improved accuracy in predicting multi-tissue gene expression from genotypes | PLoS Genetics | Fabio Morgante Peter Carbonetto Gao Wang Yuxin Zou Abhishek Sarkar | 2023/7/7 |
Empirical Bayes Covariance Decomposition, and a solution to the Multiple Tuning Problem in Sparse PCA | arXiv preprint arXiv:2312.03274 | Joonsuk Kang Matthew Stephens | 2023/12/6 |
Fine-mapping studies distinguish genetic risks for childhood-and adult-onset asthma in the HLA region | Genome Medicine | Selene M Clay Nathan Schoettler Andrew M Goldstein Peter Carbonetto Matthew Dapas | 2022/5/24 |
A flexible empirical Bayes approach to multiple linear regression and connections with penalized regression | arXiv preprint arXiv:2208.10910 | Youngseok Kim Wei Wang Peter Carbonetto Matthew Stephens | 2022/8/23 |
Appraisal Environmental and Social Review Summary (ESRS)-Development Response to Displacement Impacts Project in the Horn of Africa Phase II-P178047 | Lorena Vinuela | 2023/5/14 | |
SARS‐CoV‐2 infection and venous thromboembolism after surgery: an international prospective cohort study | Anaesthesia | COVIDSurg Collaborative GlobalSurg Collaborative Dmitri Nepogodiev Joana FF Simoes Elizabeth Li | 2022/1 |
Fine-mapping from summary data with the “Sum of Single Effects” model | PLoS Genetics | Yuxin Zou Peter Carbonetto Gao Wang Matthew Stephens | 2022/7/19 |
A flexible model for correlated count data, with application to analysis of gene expression differences in multi-condition experiments | arXiv preprint arXiv:2210.00697 | Yusha Liu Peter Carbonetto Michihiro Takahama Adam Gruenbaum Dongyue Xie | 2022/10/3 |
Discussion of “Confidence Intervals for Nonparametric Empirical Bayes Analysis” | Journal of the American Statistical Association | Bradley Efron | 2022/9/14 |
