João PGLM Rodrigues
Stanford University
H-index: 28
North America-United States
Top articles of João PGLM Rodrigues
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
Enabling structure-based drug discovery utilizing predicted models | Cell | Edward B Miller Howook Hwang Mee Shelley Andrew Placzek João PGLM Rodrigues | 2024/2/1 |
Openmm 8: Molecular dynamics simulation with machine learning potentials | The Journal of Physical Chemistry B | Peter Eastman Raimondas Galvelis Raúl P Peláez Charlles RA Abreu Stephen E Farr | 2023/12/28 |
Using AlphaFold and Experimental Structures for the Prediction of the Structure and Binding Affinities of GPCR Complexes via Induced Fit Docking and Free Energy Perturbation | Journal of Chemical Theory and Computation | Dilek Coskun Muyun Lihan João PGLM Rodrigues Márton Vass Daniel Robinson | 2023/12/15 |
An Electrostatically-steered Conformational Selection Mechanism Promotes SARS-CoV-2 Spike Protein Variation | Journal of Molecular Biology | Marija Sorokina Jaydeep Belapure Christian Tüting Reinhard Paschke Ioannis Papasotiriou | 2022/7/15 |
Predicting the zoonotic capacity of mammals to transmit SARS-CoV-2 | Proceedings of the Royal Society B | Ilya R Fischhoff Adrian A Castellanos João PGLM Rodrigues Arvind Varsani Barbara A Han | 2021/11/24 |
Predicting the specificity-determining positions of receptor tyrosine kinase Axl | Frontiers in Molecular Biosciences | Tülay Karakulak Ahmet Sureyya Rifaioglu João PGLM Rodrigues Ezgi Karaca | 2021/6/14 |
PDB‐tools Web: A User‐friendly Interface for the Manipulation of PDB Files | Proteins: Structure, Function, and Bioinformatics | Brian Jiménez‐García João MC Teixeira Mikael Trellet João PGLM Rodrigues Alexandre MJJ Bonvin | 2021/3 |
Insights on cross-species transmission of SARS-CoV-2 from structural modeling | PLoS computational biology | João PGLM Rodrigues Susana Barrera-Vilarmau João Mc Teixeira Marija Sorokina Elizabeth Seckel | 2020/12/3 |
Bacterial flagellar motor PL-ring disassembly subcomplexes are widespread and ancient | Proceedings of the National Academy of Sciences | Mohammed Kaplan Michael J Sweredoski João PGLM Rodrigues Elitza I Tocheva Yi-Wei Chang | 2020/4/21 |
Interfacea: Open-Source Library for Protein Interface Analysis | Biophysical Journal | João Pedro Garcia Lopes Maia Rodrigues Michael Levitt | 2020/2/7 |
Co-Authors
