Jianzhu Ma

Jianzhu Ma

Purdue University

H-index: 31

North America-United States

About Jianzhu Ma

Jianzhu Ma, With an exceptional h-index of 31 and a recent h-index of 30 (since 2020), a distinguished researcher at Purdue University, specializes in the field of Machine Learning, Computational Biology, Bioinformatics.

His recent articles reflect a diverse array of research interests and contributions to the field:

Selecting Large Language Model to Fine-tune via Rectified Scaling Law

Single-Cell Transcriptomics Reveals the Heterogeneity of the Immune Landscape of IDH–Wild-Type High-Grade Gliomas

DecompDiff: diffusion models with decomposed priors for structure-based drug design

ProBio: A Protocol-guided Multimodal Dataset for Molecular Biology Lab

LinkerNet: Fragment Poses and Linker Co-Design with 3D Equivariant Diffusion

xtrimogene: An efficient and scalable representation learner for single-cell rna-seq data

Extrapolating heterogeneous time-series gene expression data using Sagittarius

Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction

Jianzhu Ma Information

University

Position

___

Citations(all)

4515

Citations(since 2020)

3748

Cited By

1668

hIndex(all)

31

hIndex(since 2020)

30

i10Index(all)

49

i10Index(since 2020)

47

Email

University Profile Page

Purdue University

Google Scholar

View Google Scholar Profile

Jianzhu Ma Skills & Research Interests

Machine Learning

Computational Biology

Bioinformatics

Top articles of Jianzhu Ma

Title

Journal

Author(s)

Publication Date

Selecting Large Language Model to Fine-tune via Rectified Scaling Law

arXiv preprint arXiv:2402.02314

Haowei Lin

Baizhou Huang

Haotian Ye

Qinyu Chen

Zihao Wang

...

2024/2/4

Single-Cell Transcriptomics Reveals the Heterogeneity of the Immune Landscape of IDH–Wild-Type High-Grade Gliomas

Scientific Reports

Pere Català

Nathalie Groen

Jasmin A Dehnen

Eduardo Soares

Arianne JH van Velthoven

...

2021/11/5

DecompDiff: diffusion models with decomposed priors for structure-based drug design

arXiv preprint arXiv:2403.07902

Jiaqi Guan

Xiangxin Zhou

Yuwei Yang

Yu Bao

Jian Peng

...

2024/2/26

ProBio: A Protocol-guided Multimodal Dataset for Molecular Biology Lab

Advances in Neural Information Processing Systems

Jieming Cui

Ziren Gong

Baoxiong Jia

Siyuan Huang

Zilong Zheng

...

2024/2/13

LinkerNet: Fragment Poses and Linker Co-Design with 3D Equivariant Diffusion

Advances in Neural Information Processing Systems

Jiaqi Guan

Xingang Peng

PeiQi Jiang

Yunan Luo

Jian Peng

...

2024/2/13

xtrimogene: An efficient and scalable representation learner for single-cell rna-seq data

Advances in Neural Information Processing Systems

Jing Gong

Minsheng Hao

Xingyi Cheng

Xin Zeng

Chiming Liu

...

2024/2/13

Extrapolating heterogeneous time-series gene expression data using Sagittarius

Nature Machine Intelligence

Addie Woicik

Mingxin Zhang

Janelle Chan

Jianzhu Ma

Sheng Wang

2023/7

Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction

bioRxiv

Shitong Luo

Yufeng Su

Zuofan Wu

Chenpeng Su

Jian Peng

...

2023/3/1

Large scale foundation model on single-cell transcriptomics

bioRxiv

Minsheng Hao

Jing Gong

Xin Zeng

Chiming Liu

Yucheng Guo

...

2023/5/31

Device‐System End‐to‐End Design of Photonic Neuromorphic Processor Using Reinforcement Learning

Laser & Photonics Reviews

Yingheng Tang

Princess Tara Zamani

Ruiyang Chen

Jianzhu Ma

Minghao Qi

...

2023/2

MolDiff: addressing the atom-bond inconsistency problem in 3D molecule diffusion generation

arXiv preprint arXiv:2305.07508

Xingang Peng

Jiaqi Guan

Qiang Liu

Jianzhu Ma

2023/5/11

Scientific Computing with Diffractive Optical Neural Networks

Advanced Intelligent Systems

Ruiyang Chen

Yingheng Tang

Jianzhu Ma

Weilu Gao

2023/12

Characterizing the interaction conformation between T-cell receptors and epitopes with deep learning

Nature machine intelligence

Xingang Peng

Yipin Lei

Peiyuan Feng

Lemei Jia

Jianzhu Ma

...

2023/4

Instaflow: One step is enough for high-quality diffusion-based text-to-image generation

Xingchao Liu

Xiwen Zhang

Jianzhu Ma

Jian Peng

2023/10/13

Con-AAE: contrastive cycle adversarial autoencoders for single-cell multi-omics alignment and integration

Bioinformatics

Xuesong Wang

Zhihang Hu

Tingyang Yu

Yixuan Wang

Ruijie Wang

...

2023/4/1

Mcu: A task-centric framework for open-ended agent evaluation in minecraft

arXiv preprint arXiv:2310.08367

Haowei Lin

Zihao Wang

Jianzhu Ma

Yitao Liang

2023/10/12

3d equivariant diffusion for target-aware molecule generation and affinity prediction

arXiv preprint arXiv:2303.03543

Jiaqi Guan

Wesley Wei Qian

Xingang Peng

Yufeng Su

Jian Peng

...

2023/3/6

Equivariant point cloud analysis via learning orientations for message passing

Shitong Luo

Jiahan Li

Jiaqi Guan

Yufeng Su

Chaoran Cheng

...

2022

High-resolution de novo structure prediction from primary sequence

BioRxiv

Ruidong Wu

Fan Ding

Rui Wang

Rui Shen

Xiwen Zhang

...

2022/7/22

Pocket-specific 3d molecule generation by fragment-based autoregressive diffusion models

Xingang Peng

Jiaqi Guan

Jian Peng

Jianzhu Ma

2022/9/29

See List of Professors in Jianzhu Ma University(Purdue University)

Co-Authors

H-index: 202
Jiawei Han

Jiawei Han

University of Illinois at Urbana-Champaign

H-index: 120
Wei-Ying Ma

Wei-Ying Ma

Tsinghua University

H-index: 106
Trey Ideker

Trey Ideker

University of California, San Diego

H-index: 90
Gene Yeo PhD MBA

Gene Yeo PhD MBA

University of California, San Diego

H-index: 83
Le Song

Le Song

Georgia Institute of Technology

H-index: 76
Roded Sharan

Roded Sharan

Tel Aviv University

academic-engine