Jan Baumbach
Universität Hamburg
H-index: 50
Europe-Germany
Top articles of Jan Baumbach
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
To share or not to share? Privacy-preserving AI in medicine | RExPO22 Conference | Jan Baumbach | 2024/4/18 |
Inference of differential gene regulatory networks using boosted differential trees | Bioinformatics Advances | Gihanna Galindez Markus List Jan Baumbach Uwe Völker Ulrike Mäder | 2024/2/29 |
On the limits of 16S rRNA gene-based metagenome prediction and functional profiling | Microbial Genomics | Monica Steffi Matchado Malte Rühlemann Sandra Reitmeier Tim Kacprowski Fabian Frost | 2024/2/29 |
Single-Cell Multi-Omics Map of Cell Type–Specific Mechanistic Drivers of Multiple Sclerosis Lesions | Neurology: Neuroimmunology & Neuroinflammation | Maria L Elkjaer Anne Hartebrodt Mhaned Oubounyt Anna Weber Lars Vitved | 2024/4/2 |
Blood transcriptomics analysis offers insights into variant-specific immune response to SARS-CoV-2 | Scientific Reports | Markus Hoffmann Lina-Liv Willruth Alexander Dietrich Hye Kyung Lee Ludwig Knabl | 2024/2/2 |
Privacy-Preserving Federated Survival Support Vector Machines for Cross-Institutional Time-To-Event Analysis: Algorithm Development and Validation | JMIR AI | Julian Späth Zeno Sewald Niklas Probul Magali Berland Mathieu Almeida | 2024/3/29 |
Machine learning–based integration of network features and chemical structure of compounds for SARS‐CoV‐2 drug effect analysis | CPT: Pharmacometrics & Systems Pharmacology | Julian Späth Rui‐Sheng Wang Maeve Humphrey Jan Baumbach Joseph Loscalzo | 2024/2 |
Partial reinforcement optimizer: An evolutionary optimization algorithm | Expert Systems with Applications | Ahmad Taheri Keyvan RahimiZadeh Amin Beheshti Jan Baumbach Ravipudi Venkata Rao | 2024/3/15 |
Transcription factor prediction using protein 3D structures | bioRxiv | Fabian Neuhaus Jeanine Liebold Jan Baumbach Khalique Newaz | 2024 |
The power and limits of predicting exon-exon interactions using protein 3D structures | bioRxiv | Jeanine Liebold Aylin Del Moral-Morales Karen Manalastas-Cantos Olga Tsoy Stefan Kurtz | 2024/3/4 |
Comprehensive benchmark of differential transcript usage analysis for static and dynamic conditions | bioRxiv | Chit Tong Lio Tolga Düz Markus Daniel Hoffmann Lina-Liv Willruth Jan Baumbach | 2024 |
A single-cell multi-omics map of cell-type-specific mechanistic drivers of multiple sclerosis lesions | Available at SSRN 4517679 | Maria Louise Elkjaer Anne Hartebrodt Mhaned Oubounyt Anna Weber Lars Vitved | 2023/5/9 |
Deciphering key regulatory networks and drug repurposing candidates through scRNAseq data analysis using SCANet | 4th Belgrade Bioinformatics Conference | Mhaned Oubouny Jan Baumbach Maria L Elkjaer | 2023 |
De-novo reconstruction and identification of transcriptional gene regulatory network modules differentiating single-cell clusters | NAR Genomics and Bioinformatics | Mhaned Oubounyt Maria L Elkjaer Tanja Laske Alexander GB Grønning Marcus J Moeller | 2023/3/1 |
Alternative splicing analysis benchmark with DICAST | NAR Genomics and Bioinformatics | Amit Fenn Olga Tsoy Tim Faro Fanny LM Rößler Alexander Dietrich | 2023/6/1 |
Democratizing knowledge representation with BioCypher | Nature Biotechnology | Sebastian Lobentanzer Patrick Aloy Jan Baumbach Balazs Bohar Vincent J Carey | 2023/8 |
Integrated Tools for Enhancing Network-based Disease Module Identification, Drug Prioritization and Repurposing | RExPO22 Conference | Andreas Maier Klaudia Adamowicz Mia Le Marcos Chow Castro Klara Kemnitz | 2023/9/23 |
Proteomic meta-study harmonization, mechanotyping and drug repurposing candidate prediction with ProHarMeD | npj Systems Biology and Applications | Klaudia Adamowicz Lis Arend Andreas Maier Johannes R Schmidt Bernhard Kuster | 2023/10/10 |
Differentially Private Federated Learning: Privacy and Utility Analysis of Output Perturbation and DP-SGD | Anastasia Pustozerova Jan Baumbach Rudolf Mayer | 2023/12/15 | |
circRNA-sponging: a pipeline for extensive analysis of circRNA expression and their role in miRNA sponging | Bioinform Adv. | List M. Hoffmann M Schwartz L Ciora OA Trummer N Willruth LL | 2023 |
Co-Authors
