Cole Trapnell
University of Washington
H-index: 67
North America-United States
Top articles of Cole Trapnell
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
Multiplex single-cell chemical genomics reveals the kinase dependence of the response to targeted therapy | Cell Genomics | José L McFaline-Figueroa Sanjay Srivatsan Andrew J Hill Molly Gasperini Dana L Jackson | 2024/2/14 |
Disruption of GM-CSF Signaling in Pap Increases Lymphoid Lineage Commitment and Pulmonary Lymphocytosis | BC Trapnell P Arumugam C Williams D Read M Mantilla | 2024/5 | |
A single-cell time-lapse of mouse prenatal development from gastrula to birth | Nature | Chengxiang Qiu Beth K Martin Ian C Welsh Riza M Daza Truc-Mai Le | 2024/2/14 |
A multiplexed, single-cell sequencing screen identifies compounds that increase neurogenic reprogramming of murine Muller glia | bioRxiv | Amy Tresenrider Marcus Hooper Levi Todd Faith Kierney Nicolai Blasdel | 2023/9/27 |
Dystrophin deficiency impairs cell junction formation during embryonic myogenesis | bioRxiv | Elise Mozin Emmanuelle Massouridès Virginie Mournetas Clémence Lièvre Audrey Bourdon | 2023 |
A single-cell transcriptional timelapse of mouse embryonic development, from gastrula to pup | bioRxiv | Chengxiang Qiu Beth K Martin Ian C Welsh Riza M Daza Truc-Mai Le | 2023/4/5 |
Transcriptomic profiling of tissue environments critical for post-embryonic patterning and morphogenesis of zebrafish skin | Elife | Andrew J Aman Lauren M Saunders August A Carr Sanjay Srivatasan Colten Eberhard | 2023/9/11 |
High-capacity sample multiplexing for single cell chromatin accessibility profiling | BMC genomics | Gregory T Booth Riza M Daza Sanjay R Srivatsan José L McFaline-Figueroa Rula Green Gladden | 2023/12/4 |
Optimized single-nucleus transcriptional profiling by combinatorial indexing | Beth K Martin Chengxiang Qiu Eva Nichols Melissa Phung Rula Green-Gladden | 2023/1 | |
Transcriptional Activation of Regenerative Hematopoiesis via Vascular Niche Sensing | bioRxiv | Tomer Itkin Sean Houghton Ryan Schreiner Yang Lin Chaitanya R Badwe | 2023/3/29 |
Single-cell sequencing of individual retinal organoids reveals determinants of cell-fate heterogeneity | Cell Reports Methods | Amy Tresenrider Akshayalakshmi Sridhar Kiara C Eldred Sophia Cuschieri Dawn Hoffer | 2023/8/28 |
Embryo-scale reverse genetics at single-cell resolution | Nature | Lauren M Saunders Sanjay R Srivatsan Madeleine Duran Michael W Dorrity Brent Ewing | 2023/11/23 |
Modulation of FGF pathway signaling and vascular differentiation using designed oligomeric assemblies | bioRxiv | Natasha I Edman Rachel L Redler Ashish Phal Thomas Schlichthaerle Sanjay R Srivatsan | 2023/3/15 |
Predicting cellular responses to complex perturbations in high‐throughput screens | Molecular systems biology | Mohammad Lotfollahi Anna Klimovskaia Susmelj Carlo De Donno Leon Hetzel Yuge Ji | 2023/6/12 |
Single-cell, whole-embryo phenotyping of mammalian developmental disorders | Nature | Xingfan Huang Jana Henck Chengxiang Qiu Varun KA Sreenivasan Saranya Balachandran | 2023/11/23 |
Pulmonary osteoclast-like cells in silica induced pulmonary fibrosis | bioRxiv | Yoshihiro Hasegawa Jennifer M Franks Yusuke Tanaka Yasuaki Uehara David F Read | 2023/2/18 |
Differentiation latency and dormancy signatures define fetal liver HSCs at single cell resolution | bioRxiv | Takashi Ishida Adam M Heck Barbara Varnum-Finney Stacey Dozono Cynthia Nourigat-McKay | 2023/6/5 |
Proteostasis governs differential temperature sensitivity across embryonic cell types | Cell | Michael W Dorrity Lauren M Saunders Madeleine Duran Sanjay R Srivatsan Eliza Barkan | 2023/11/9 |
Single-cell transcriptomic profiling of the zebrafish inner ear reveals molecularly distinct hair cell and supporting cell subtypes | Elife | Tuo Shi Marielle O Beaulieu Lauren M Saunders Peter Fabian Cole Trapnell | 2023/1/4 |
A multiplexed single-cell sequencing based screen identifies compounds that increase the neurogenic potential of Muller glia in the adult mouse retina. | Investigative Ophthalmology & Visual Science | Levi Todd Amy Tresenrider Marcus Hooper Faith Kierney Cole Trapnell | 2023/6/1 |
Co-Authors
