Zhi John Lu

Zhi John Lu

Tsinghua University

H-index: 39

Asia-China

Contact Zhi John Lu

About Zhi John Lu

Zhi John Lu, With an exceptional h-index of 39 and a recent h-index of 35 (since 2020), a distinguished researcher at Tsinghua University, specializes in the field of Bioinformatics, Noncoding RNA.

His recent articles reflect a diverse array of research interests and contributions to the field:

cfOmics: a cell-free multi-Omics database for diseases

OligoFormer: an accurate and robust prediction method for siRNA design

Cell-free multi-omics analysis reveals potential biomarkers in gastrointestinal cancer patients’ blood

Cell‐free RNA for the liquid biopsy of gastrointestinal cancer

A comprehensive evaluation of full-spectrum cell-free RNAs highlights cell-free RNA fragments for early-stage hepatocellular carcinoma detection

Pathformer: a biological pathway informed Transformer integrating multi-omics data for disease diagnosis and prognosis

Pathformer: biological pathway informed transformer model integrating multi-modal data of cancer

Cell-free multi-omics analysis reveals tumor status-informative signatures in gastrointestinal cancer patients’ plasma

Zhi John Lu Information

University	Tsinghua University
Position	PI
Citations(all)	21563
Citations(since 2020)	10181
Cited By	17601
hIndex(all)	39
hIndex(since 2020)	35
i10Index(all)	58
i10Index(since 2020)	50
Email	Access Email
University Profile Page	Tsinghua University
Google Scholar	View Google Scholar Profile

Zhi John Lu Skills & Research Interests

Bioinformatics

Noncoding RNA

Top articles of Zhi John Lu

cfOmics: a cell-free multi-Omics database for diseases

Nucleic Acids Research

2024/1/5

Mingyang Li

H-Index: 12

Mingfei Han

H-Index: 3

Xiaoqing Chen

H-Index: 11

Xiaojuan Wang

H-Index: 7

Qian Lu

H-Index: 10

Zhi John Lu

H-Index: 30

OligoFormer: an accurate and robust prediction method for siRNA design

bioRxiv

2024

Zhi John Lu

H-Index: 30

Cell-free multi-omics analysis reveals potential biomarkers in gastrointestinal cancer patients’ blood

Cell Reports Medicine

2023/11/21

Yu Li

H-Index: 11

Mingyang Li

H-Index: 12

Xiaojuan Wang

H-Index: 7

Yumin Zhu

H-Index: 8

Ying Feng

H-Index: 3

Xiaohua Zhang

H-Index: 5

Qiaoran Xi

H-Index: 15

Qian Lu

H-Index: 10

Zhi John Lu

H-Index: 30

Cell‐free RNA for the liquid biopsy of gastrointestinal cancer

2023/9

Yumin Zhu

H-Index: 8

Siqi Wang

H-Index: 6

Xinhua Zhang

H-Index: 15

Zhi John Lu

H-Index: 30

A comprehensive evaluation of full-spectrum cell-free RNAs highlights cell-free RNA fragments for early-stage hepatocellular carcinoma detection

EBioMedicine

2023/7/1

Peng Cai

H-Index: 6

Xiaofan Liu

H-Index: 7

Yi Luo

H-Index: 10

Hua Guo

H-Index: 10

Zhuoran Wang

H-Index: 2

Lu Chen

H-Index: 8

Zhi John Lu

H-Index: 30

Pathformer: a biological pathway informed Transformer integrating multi-omics data for disease diagnosis and prognosis

2023/5/24

Pathformer: biological pathway informed transformer model integrating multi-modal data of cancer

2023/5/24

Cell-free multi-omics analysis reveals tumor status-informative signatures in gastrointestinal cancer patients’ plasma

bioRxiv

2023/2/3

Yu Li

H-Index: 11

Xiaojuan Wang

H-Index: 7

Yumin Zhu

H-Index: 8

Ying Feng

H-Index: 3

Xiaohua Zhang

H-Index: 5

Qiaoran Xi

H-Index: 15

Qian Lu

H-Index: 10

Zhi John Lu

H-Index: 30

Depletion-assisted multiplexing cell-free RNA sequencing reveals distinct human and microbial signatures in plasma versus extracellular vesicle

bioRxiv

2023/2/3

Hongjie Guo

H-Index: 2

Zhi John Lu

H-Index: 30

BATTER: Accurate Prediction of Rho-dependent and Rho-independent Transcription Terminators in Metagenomes

bioRxiv

2023

Zhi John Lu

H-Index: 30

Widespread autogenous mRNA–protein interactions detected by CLIP-seq

Nucleic Acids Research

2022/9/23

Long non-coding RNA DARS-AS1 promotes tumor progression by directly suppressing PACT-mediated cellular stress

Communications biology

2022/8/15

Liuqing Yang

H-Index: 40

Lin Zhu

H-Index: 5

Zhi John Lu

H-Index: 30

Dong Wang

H-Index: 7

Cancer type classification using plasma cell-free RNAs derived from human and microbes

Elife

2022/7/11

Siqi Wang

H-Index: 6

Xiaofan Liu

H-Index: 7

Yichen Hu

H-Index: 5

Hongyan Chen

H-Index: 3

Xin Wang

H-Index: 6

Zhihua Liu

H-Index: 3

Ning Zhang

H-Index: 27

Zhi John Lu

H-Index: 30

A Nodal enhanced micropeptide NEMEP regulates glucose uptake during mesendoderm differentiation of embryonic stem cells

Nature Communications

2022/7/9

Kun Yan

H-Index: 1

Yang Yang

H-Index: 9

Yafei Yuan

H-Index: 5

Nan Wang

H-Index: 8

Zhi John Lu

H-Index: 30

Qiaoran Xi

H-Index: 15

POSTAR3: an updated platform for exploring post-transcriptional regulation coordinated by RNA-binding proteins

Nucleic Acids Research

2022/1/7

Shang Zhang

H-Index: 1

Yumin Zhu

H-Index: 8

Shuyuan Chen

H-Index: 17

Zhi John Lu

H-Index: 30

A deep learning method for recovering missing signals in transcriptome-wide RNA structure profiles from probing experiments

Nature Machine Intelligence

2021/11

Jing Gong

H-Index: 22

Kui Xu

H-Index: 20

Zhi John Lu

H-Index: 30

Qiangfeng Cliff Zhang

H-Index: 25

Methylome profiling identifies TCHH methylation in CfDNA as a noninvasive marker of liver metastasis in colorectal cancer

The FASEB Journal

2021/7

Tao Liu

H-Index: 6

Jing Zhu

H-Index: 12

Xin Wang

H-Index: 6

Zhi John Lu

H-Index: 30

Integrative genomic analysis of early neurogenesis reveals a temporal genetic program for differentiation and specification of preplate and Cajal-Retzius neurons

PLoS Genetics

2021/3/24

Jia Li

H-Index: 0

Lei Sun

H-Index: 4

Zhi John Lu

H-Index: 30

Qin Shen

H-Index: 16

Integrative analysis of long extracellular RNAs reveals a detection panel of noncoding RNAs for liver cancer

Theranostics

2021

Yumin Zhu

H-Index: 8

Siqi Wang

H-Index: 6

Xiaofan Liu

H-Index: 7

Peng Cai

H-Index: 6

Xiaodong Jia

H-Index: 27

Lei Chen

H-Index: 18

Zhi John Lu

H-Index: 30

Tissue-specific transcription reprogramming promotes liver metastasis of colorectal cancer

Cell research

2020/1

Ming Yang

H-Index: 14

Rui Qi

H-Index: 3

Yiming Huang

H-Index: 12

Qianyu Wang

H-Index: 1

Shasha Li

H-Index: 8

Yang Cao

H-Index: 5

Wei Guo

H-Index: 1

Ivan Garcia-Bassets

H-Index: 14

Zhi John Lu

H-Index: 30

Dong Wang

H-Index: 7

See List of Professors in Zhi John Lu University(Tsinghua University)

Co-Authors

H-index: 193

Mark Gerstein — Mark Gerstein
Yale University

Visit Mark Gerstein Page

H-index: 62

David H. Mathews — David H. Mathews
University of Rochester

Visit David H. Mathews Page

H-index: 60

Joel Rozowsky — Joel Rozowsky
Yale University

Visit Joel Rozowsky Page

H-index: 57

Chao Cheng — Chao Cheng
Baylor College of Medicine

Visit Chao Cheng Page

H-index: 42

Ekta Khurana — Ekta Khurana
Cornell University

Visit Ekta Khurana Page

H-index: 42

Yong Kong — Yong Kong
Yale University

Visit Yong Kong Page

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