Yufeng Shen
Columbia University in the City of New York
H-index: 60
North America-United States
Top articles of Yufeng Shen
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
PreMode predicts mode of action of missense variants by deep graph representation learning of protein sequence and structural context | bioRxiv | Guojie Zhong Yige Zhao Demi Zhuang Wendy K Chung Yufeng Shen | 2024 |
Homozygous missense variants in YKT6 result in loss of function and are associated with developmental delay, with or without severe infantile liver disease and risk for … | Genetics in Medicine | Mengqi Ma Mythily Ganapathi Yiming Zheng Kai-Li Tan Oguz Kanca | 2024/3/21 |
Functional dissection of human cardiac enhancers and noncoding de novo variants in congenital heart disease | Nature Genetics | Feng Xiao Xiaoran Zhang Sarah U Morton Seong Won Kim Youfei Fan | 2024/2/20 |
Rescuing lung development through embryonic inhibition of histone acetylation | Science Translational Medicine | Giangela Stokes Zhuowei Li Nicole Talaba William Genthe Maria B Brix | 2024/1/31 |
Heterogeneity of comprehensive clinical phenotype and longitudinal adaptive function and correlation with computational predictions of severity of missense genotypes in KIF1A … | medRxiv | Khemika K Sudnawa Wenxing Li Sean Calamia Cara H Kanner Jennifer M Bain | 2024 |
Tissue adaptation and clonal segregation of human memory T cells in barrier sites | Nature immunology | Maya ML Poon Daniel P Caron Zicheng Wang Steven B Wells David Chen | 2023/2 |
VBASS enables integration of single cell gene expression data in Bayesian association analysis of rare variants | Communications Biology | Guojie Zhong Yoolim A Choi Yufeng Shen | 2023/7/25 |
A probabilistic graphical model for estimating selection coefficient of missense variants from human population sequence data | medRxiv | Yige Zhao Guojie Zhong Jake Hagen Hongbing Pan Wendy K Chung | 2023/12/13 |
SABRE: Self-Attention Based model for predicting T-cell Receptor Epitope Specificity | bioRxiv | Zicheng Wang Yufeng Shen | 2023 |
Contribution of previously unrecognized RNA splice-altering variants to congenital heart disease | Circulation: Genomic and Precision Medicine | Min Young Jang Parth N Patel Alexandre C Pereira Jon AL Willcox Alireza Haghighi | 2023/6 |
Rare predicted loss of function alleles in Bassoon (BSN) are associated with obesity | NPJ Genomic Medicine | Na Zhu Charles A LeDuc Ilene Fennoy Blandine Laferrère Claudia A Doege | 2023/10/21 |
P111: Phenotypic insights into newly established moderate effect genes for autism spectrum disorder | Genetics in Medicine Open | Sarah Barns Chang Shu Jessica Wright Alexandra Goler Jacob Hall | 2023/1/1 |
Returning integrated genomic risk and clinical recommendations: The eMERGE study | Genetics in Medicine | Jodell E Linder Aimee Allworth Harris T Bland Pedro J Caraballo Rex L Chisholm | 2023/4/1 |
Disrupted endosomal trafficking of the Vangl-Celsr polarity complex underlies congenital anomalies in trachea-esophageal morphogenesis | bioRxiv | Nicole A Edwards Adhish Kashyap Alissa Warren Zachary N Agricola Alan P Kenny | 2023/10/11 |
SHINE: protein language model-based pathogenicity prediction for short inframe insertion and deletion variants | Briefings in Bioinformatics | Xiao Fan Hongbing Pan Alan Tian Wendy K Chung Yufeng Shen | 2023/1 |
Association of Predicted Damaging De Novo Variants on Ventricular Function in Individuals With Congenital Heart Disease | Circulation: Genomic and Precision Medicine | Matthew J Lewis Alexander Hsieh Lu Qiao Renjie Tan Brigitte Kazzi | 2023/4 |
PLS3 missense variants affecting the actin-binding domains cause X-linked congenital diaphragmatic hernia and body-wall defects | The American Journal of Human Genetics | Florence Petit Mauro Longoni Julie Wells Richard S Maser Eric L Bogenschutz | 2023/10/5 |
Evidence-based assessment of congenital heart disease genes to enable returning results in a genomic study | Circulation: Genomic and Precision Medicine | Emily L Griffin Shannon N Nees Sarah U Morton Julia Wynn Nihir Patel | 2023/4 |
Site-specific development and progressive maturation of human tissue-resident memory T cells over infancy and childhood | Immunity | Thomas J Connors Rei Matsumoto Shivali Verma Peter A Szabo Rebecca Guyer | 2023/8/8 |
Neither cardiac mitochondrial DNA variation nor copy number contribute to congenital heart disease risk | The American Journal of Human Genetics | Jon AL Willcox Joshua T Geiger Sarah U Morton David McKean Daniel Quiat | 2022/5/5 |
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