Yingbo Cui

About Yingbo Cui

Yingbo Cui, With an exceptional h-index of 8 and a recent h-index of 7 (since 2020), a distinguished researcher at National University of Defense Technology, specializes in the field of Parallel computing, Bioinformatics.

His recent articles reflect a diverse array of research interests and contributions to the field:

SNCL: a supernode OpenCL implementation for hybrid computing arrays

DrugProtKGE: Weakly Supervised Knowledge Graph Embedding for Highly-Effective Drug-Protein Interaction Representation

MTMap: A Long-Read Alignment Tool based on Multi-Core DSPs

Performance Evaluation of Spark, Ray and MPI: A Case Study on Long Read Alignment Algorithm

MinimapR: A parallel alignment tool for the analysis of large-scale third-generation sequencing data

MSVF: Multi-task Structure Variation Filter with Transfer Learning in High-throughput Sequencing

H-VAE: A Hybrid Variational AutoEncoder with Data Augmentation in Predicting CRISPR/Cas9 Off-target

Large-scale parallel alignment algorithm for smrt reads

Yingbo Cui Information

University

Position

___

Citations(all)

608

Citations(since 2020)

573

Cited By

200

hIndex(all)

8

hIndex(since 2020)

7

i10Index(all)

7

i10Index(since 2020)

5

Email

University Profile Page

Google Scholar

Yingbo Cui Skills & Research Interests

Parallel computing

Bioinformatics

Top articles of Yingbo Cui

Title

Journal

Author(s)

Publication Date

SNCL: a supernode OpenCL implementation for hybrid computing arrays

The Journal of Supercomputing

Tao Tang

Kai Lu

Lin Peng

Yingbo Cui

Jianbin Fang

...

2023/12/8

DrugProtKGE: Weakly Supervised Knowledge Graph Embedding for Highly-Effective Drug-Protein Interaction Representation

Yanlong Qiu

Siqi Wang

Xi Yang

Xinyuan Qiu

Chengkun Wu

...

2023/12/5

MTMap: A Long-Read Alignment Tool based on Multi-Core DSPs

Yufei Guo

Xinjie An

Shijie Li

Yingbo Cui

Peng Zhang

...

2023/12/5

Performance Evaluation of Spark, Ray and MPI: A Case Study on Long Read Alignment Algorithm

Kun Ran

Yingbo Cui

Zihang Wang

Shaoliang Peng

2023/10/20

MinimapR: A parallel alignment tool for the analysis of large-scale third-generation sequencing data

Computational Biology and Chemistry

Zihang Wang

Yingbo Cui

Shaoliang Peng

Xiangke Liao

Yangbo Yu

2022/8/1

MSVF: Multi-task Structure Variation Filter with Transfer Learning in High-throughput Sequencing

Weiming Xiang

Yingbo Cui

Yaning Yang

Ang Zhang

Boya Ji

...

2022/12/6

H-VAE: A Hybrid Variational AutoEncoder with Data Augmentation in Predicting CRISPR/Cas9 Off-target

Weiming Xiang

Dong Chen

Yingbo Cui

Shaoliang Peng

2021/12/9

Large-scale parallel alignment algorithm for smrt reads

Zeyu Xia

Yingbo Cui

Ang Zhang

Peng Zhang

Sifan Long

...

2021/12/3

A review of parallel implementations for the Smith–Waterman algorithm

Zeyu Xia

Yingbo Cui

Ang Zhang

Tao Tang

Lin Peng

...

2021/9/6

VISPR-online: a web-based interactive tool to visualize CRISPR screening experiments

BMC bioinformatics

Yingbo Cui

Zihang Wang

Johannes Köster

Xiangke Liao

Shaoliang Peng

...

2021/6/24

CRISP-view: a database of functional genetic screens spanning multiple phenotypes

Nucleic acids research

Yingbo Cui

Xiaolong Cheng

Qing Chen

Bicna Song

Anthony Chiu

...

2021/1/8

OffScan: a universal and fast CRISPR off-target sites detection tool

BMC genomics

Yingbo Cui

Xiangke Liao

Shaoliang Peng

Tao Tang

Chun Huang

...

2020/3

基因组大数据变异检测算法的并行优化

大数据

崔英博, 黄春, 唐滔, 杨灿群, 廖湘科, 彭绍亮

2020

See List of Professors in Yingbo Cui University(National University of Defense Technology)