Venkat S Malladi

Venkat S Malladi

University of Texas Southwestern Medical Center

H-index: 34

North America-United States

About Venkat S Malladi

Venkat S Malladi, With an exceptional h-index of 34 and a recent h-index of 29 (since 2020), a distinguished researcher at University of Texas Southwestern Medical Center, specializes in the field of genomics ontology regulatory networks reprodiciblity.

His recent articles reflect a diverse array of research interests and contributions to the field:

The GA4GH Task Execution API: Enabling Easy Multi Cloud Task Execution

Optimizing genomics pipeline execution with integer linear programming

The ENCODE uniform analysis pipelines

Tumor loss-of-function mutations in STK11/LKB1 induce cachexia

Novel long non-coding RNAs associated with inflammation and macrophage activation in human

Abstract P6-12-03: Proinflammatory and estrogen signaling modulates the chemoresistance and metastasis of breast cancer cells through post-translational modifications of …

Enhancer and super-enhancer landscape in polycystic kidney disease

Decoding Human Genome Regulatory Features That Influence HIV-1 Proviral Expression and Fate Through an Integrated Genomics Approach

Venkat S Malladi Information

University

Position

Faculty Associate at

Citations(all)

21549

Citations(since 2020)

10341

Cited By

17555

hIndex(all)

34

hIndex(since 2020)

29

i10Index(all)

47

i10Index(since 2020)

42

Email

University Profile Page

University of Texas Southwestern Medical Center

Google Scholar

View Google Scholar Profile

Venkat S Malladi Skills & Research Interests

genomics ontology regulatory networks reprodiciblity

Top articles of Venkat S Malladi

Title

Journal

Author(s)

Publication Date

The GA4GH Task Execution API: Enabling Easy Multi Cloud Task Execution

arXiv preprint arXiv:2405.00013

Alexander Kanitz

Matthew H McLoughlin

Liam Beckman

Venkat S Malladi

Kyle P Ellrott

2024/2/8

Optimizing genomics pipeline execution with integer linear programming

bioRxiv

Olesya Melnichenko

Venkat Malladi

2024

The ENCODE uniform analysis pipelines

Research Square

Benjamin C Hitz

Jin-Wook Lee

Otto Jolanki

Meenakshi S Kagda

Keenan Graham

...

2023/7/19

Tumor loss-of-function mutations in STK11/LKB1 induce cachexia

JCI insight

Puneeth Iyengar

Aakash Y Gandhi

Jorge Granados

Tong Guo

Arun Gupta

...

2023/4/4

Novel long non-coding RNAs associated with inflammation and macrophage activation in human

Scientific Reports

Avisankar Chini

Prarthana Guha

Venkat S Malladi

Zibiao Guo

Subhrangsu S Mandal

2023/3/10

Abstract P6-12-03: Proinflammatory and estrogen signaling modulates the chemoresistance and metastasis of breast cancer cells through post-translational modifications of …

Cancer Research

Shen Li

Hector L Franco

Hyunsoo Kim

Rosemary N Plagens

Raul Mendez-Giraldez

...

2023/3/1

Enhancer and super-enhancer landscape in polycystic kidney disease

Kidney international

Ronak Lakhia

Abheepsa Mishra

Laurence Biggers

Venkat Malladi

Patricia Cobo-Stark

...

2023/1/1

Decoding Human Genome Regulatory Features That Influence HIV-1 Proviral Expression and Fate Through an Integrated Genomics Approach

Bioinformatics and Biology Insights

Holly Ruess

Jeon Lee

Carlos Guzman

Venkat S Malladi

Iván D’Orso

2022/2

Targeting ESR1 mutation–induced transcriptional addiction in breast cancer with BET inhibition

JCI insight

Sm N Udden

Qian Wang

Sunil Kumar

Venkat S Malladi

Shwu-Yuan Wu

...

2022/9/9

Glucose starvation induces a switch in the histone acetylome for activation of gluconeogenic and fat metabolism genes

Molecular cell

Wen-Chuan Hsieh

Benjamin M Sutter

Holly Ruess

Spencer D Barnes

Venkat S Malladi

...

2022/1/6

Epigenetic repression of STING by MYC promotes immune evasion and resistance to immune checkpoint inhibitors in triple-negative breast cancer

Cancer immunology research

Kyung-min Lee

Chang-Ching Lin

Alberto Servetto

Joonbeom Bae

Vishal Kandagatla

...

2022/7/1

SeqWho: reliable, rapid determination of sequence file identity using k-mer frequencies in Random Forest classifiers

Bioinformatics

Christopher Bennett

Micah Thornton

Chanhee Park

Gervaise Henry

Yun Zhang

...

2022/4/1

Germline and sporadic mTOR pathway mutations in low-grade oncocytic tumor of the kidney

Modern Pathology

Payal Kapur

Ming Gao

Hua Zhong

Suneetha Chintalapati

Midori Mitui

...

2022/3/1

Improving renal tumor biopsy prognostication with BAP1 analyses

Archives of pathology & laboratory medicine

Payal Kapur

Sasan Setoodeh

Ellen Araj

Jingsheng Yan

Venkat S Malladi

...

2022/2/2

PARP-1 regulates estrogen-dependent gene expression in estrogen receptor α–positive breast cancer cells

Molecular Cancer Research

Shrikanth S Gadad

Cristel V Camacho

Venkat Malladi

Charles R Hutti

Anusha Nagari

...

2021/10/1

IRF1 governs the differential interferon-stimulated gene responses in human monocytes and macrophages by regulating chromatin accessibility

Cell reports

Ran Song

Yajing Gao

Igor Dozmorov

Venkat Malladi

Irene Saha

...

2021/3/23

Cancer drug discovery as a low rank tensor completion problem

bioRxiv

Vasanth S Murali

Didem Ağaç Çobanoğlu

Michael Hsieh

Meyer Zinn

Venkat S Malladi

...

2021/3/9

A multi-omic single-cell landscape of human gynecologic malignancies

Molecular cell

Matthew J Regner

Kamila Wisniewska

Susana Garcia-Recio

Aatish Thennavan

Raul Mendez-Giraldez

...

2021/12/2

A scalable open-source MATLAB toolbox for reconstruction and analysis of multispectral optoacoustic tomography data

Scientific reports

Devin O’Kelly

James Campbell III

Jeni L Gerberich

Paniz Karbasi

Venkat Malladi

...

2021/10/6

Single‐cell analysis of mouse and human prostate reveals novel fibroblasts with specialized distribution and microenvironment interactions

The Journal of pathology

Diya B Joseph

Gervaise H Henry

Alicia Malewska

Jeffrey C Reese

Ryan J Mauck

...

2021/10

See List of Professors in Venkat S Malladi University(University of Texas Southwestern Medical Center)