Ulrich Zachariae

Ulrich Zachariae

University of Dundee

H-index: 33

Europe-United Kingdom

About Ulrich Zachariae

Ulrich Zachariae, With an exceptional h-index of 33 and a recent h-index of 25 (since 2020), a distinguished researcher at University of Dundee, specializes in the field of Membrane Proteins, Structural Biology, Molecular Dynamics Simulations.

His recent articles reflect a diverse array of research interests and contributions to the field:

Multidrug efflux in Gram-negative bacteria: structural modifications in active compounds leading to efflux pump avoidance

Accurate prediction of dynamic protein–ligand binding using P‐score ranking

Mechanism of negative μ-opioid receptor modulation by sodium ions

Characterisation of ligand gating, ion conduction and the ion selectivity mechanism in the endo-lysosomal ion channel hTPC2

Accurate prediction of ligand binding for a flexible protein using P-score ranking.

Fast prediction of antibiotic permeability through membrane channels using Brownian dynamics

A hydrophobic funnel governs monovalent cation selectivity in the ion channel TRPM5

Data-driven derivation of molecular substructures that enhance drug activity in gram-negative bacteria

Ulrich Zachariae Information

University

Position

Professor of Molecular Biophysics

Citations(all)

3547

Citations(since 2020)

1846

Cited By

2467

hIndex(all)

33

hIndex(since 2020)

25

i10Index(all)

54

i10Index(since 2020)

39

Email

University Profile Page

Google Scholar

Ulrich Zachariae Skills & Research Interests

Membrane Proteins

Structural Biology

Molecular Dynamics Simulations

Top articles of Ulrich Zachariae

Title

Journal

Author(s)

Publication Date

Multidrug efflux in Gram-negative bacteria: structural modifications in active compounds leading to efflux pump avoidance

npj Antimicrobials and Resistance

Dominik Gurvic

Ulrich Zachariae

2024/3/16

Accurate prediction of dynamic protein–ligand binding using P‐score ranking

Journal of Computational Chemistry

Peter EGF Ibrahim

Fabio Zuccotto

Ulrich Zachariae

Ian Gilbert

Mike Bodkin

2024/4/22

Mechanism of negative μ-opioid receptor modulation by sodium ions

bioRxiv

Neil J Thomson

Ulrich Zachariae

2023

Characterisation of ligand gating, ion conduction and the ion selectivity mechanism in the endo-lysosomal ion channel hTPC2

bioRxiv

Alp Tegin Şahin

Ulrich Zachariae

2023/11/2

Accurate prediction of ligand binding for a flexible protein using P-score ranking.

Peter EGF Ibrahim

Fabio Zuccotto

Ulrich Zachariae

Ian Gilbert

Mike Bodkin

2023/10/20

Fast prediction of antibiotic permeability through membrane channels using Brownian dynamics

Biophysical Journal

Abhishek Acharya

Kalyanashis Jana

Dominik Gurvic

Ulrich Zachariae

Ulrich Kleinekathöfer

2023/7/25

A hydrophobic funnel governs monovalent cation selectivity in the ion channel TRPM5

BioRxiv

Callum M Ives

Alp Tegin Şahin

Neil J Thomson

Ulrich Zachariae

2023/1/12

Data-driven derivation of molecular substructures that enhance drug activity in gram-negative bacteria

Journal of Medicinal Chemistry

Dominik Gurvic

Andrew G Leach

Ulrich Zachariae

2022/4/15

Correction: A two-lane mechanism for selective biological ammonium transport

Elife

Gordon Williamson

Giulia Tamburrino

Adriana Bizior

Mélanie Boeckstaens

Gaëtan Dias Mirandela

...

2022/1/27

Systematic analysis of biomolecular conformational ensembles with PENSA

arXiv preprint arXiv:2212.02714

Martin Vögele

Neil J Thomson

Sang T Truong

Jasper McAvity

Ulrich Zachariae

...

2022/12/6

The SARS-CoV-2 envelope (E) protein forms a calcium-and voltage-activated calcium channel

bioRxiv

Lysbeth H Antonides

Quenton W Hurst

Callum M Ives

Kiefer Ramberg

Nikitas Ostrovitsa

...

2022/10/11

Characterisation of the Rh50 protein from the ammonia-oxidising bacterium Nitrosomonas europaea

Access Microbiology

Adriana Bizior

Gordon Williamson

Gaëtan Dias Mirandela

Mélanie Boeckstaens

Paul Hoskisson

...

2022/5/18

Coexistence of ammonium transporter and channel mechanisms in Amt-Mep-Rh twin-his variants impairs the filamentation signaling capacity of fungal Mep2 transceptors

Mbio

Gordon Williamson

Ana Sofia Brito

Adriana Bizior

Giulia Tamburrino

Gaëtan Dias Mirandela

...

2022/4/26

An antibiotic-resistance conferring mutation in a neisserial porin: Structure, ion flux, and ampicillin binding

Biochimica et Biophysica Acta (BBA) - Biomembranes

Annika Bartsch

Callum M. Ives

Christof Kattner

Florian Pein

Manuel Diehn

...

2021/6/1

A mechanistic switch from selective transporter to an ion channel impairs the filamentation signalling capability of ammonium transceptors in yeast

bioRxiv

Gordon Williamson

Ana Sofia Brito

Adriana Bizior

Giulia Tamburrino

Gaëtan Dias Mirandela

...

2021/8/25

The persistent question of potassium channel permeation mechanisms

Andrei Mironenko

Ulrich Zachariae

Bert L de Groot

Wojciech Kopec

2021/8/20

Ion-water coupling controls class A GPCR signal transduction pathways

bioRxiv

Neil J Thomson

Owen N Vickery

Callum M Ives

Ulrich Zachariae

2020/8/28

Positively selected modifications in the pore of TbAQP2 allow pentamidine to enter Trypanosoma brucei

Elife

Ali H Alghamdi

Jane C Munday

Gustavo Daniel Campagnaro

Dominik Gurvic

Fredrik Svensson

...

2020/8/11

GPCRmd uncovers the dynamics of the 3D-GPCRome

Nature Methods

Ismael Rodríguez-Espigares

Mariona Torrens-Fontanals

Johanna KS Tiemann

David Aranda-García

Juan Manuel Ramírez-Anguita

...

2020/8/2

On the ion coupling mechanism of the MATE transporter ClbM

Biochimica et Biophysica Acta (BBA)-Biomembranes

Alexander Krah

Roland G Huber

Ulrich Zachariae

Peter J Bond

2020/2/1

See List of Professors in Ulrich Zachariae University(University of Dundee)