Tunca Dogan

Tunca Dogan

Hacettepe Üniversitesi

H-index: 22

Asia-Turkey

About Tunca Dogan

Tunca Dogan, With an exceptional h-index of 22 and a recent h-index of 22 (since 2020), a distinguished researcher at Hacettepe Üniversitesi, specializes in the field of Bioinformatics, Cheminformatics, Machine/Deep Learning, Biomedical Data Science, AI.

His recent articles reflect a diverse array of research interests and contributions to the field:

An integrative framework for clinical diagnosis and knowledge discovery from exome sequencing data

SELFormer: Molecular Representation Learning via SELFIES Language Models

Target Specific De Novo Design of Drug Candidate Molecules with Graph Transformer-based Generative Adversarial Networks

How to approach machine learning-based prediction of drug/compound–target interactions

ASCARIS: Positional feature annotation and protein structure-based representation of single amino acid variations

ProFAB–Open Protein Functional Annotation Benchmark

Democratizing knowledge representation with BioCypher

UniProt: the Universal Protein knowledgebase in 2023

Tunca Dogan Information

University

Position

Associate Professor Department of Computer Science / Institute of Informatics

Citations(all)

26013

Citations(since 2020)

20177

Cited By

12453

hIndex(all)

22

hIndex(since 2020)

22

i10Index(all)

30

i10Index(since 2020)

29

Email

University Profile Page

Hacettepe Üniversitesi

Google Scholar

View Google Scholar Profile

Tunca Dogan Skills & Research Interests

Bioinformatics

Cheminformatics

Machine/Deep Learning

Biomedical Data Science

AI

Top articles of Tunca Dogan

Title

Journal

Author(s)

Publication Date

An integrative framework for clinical diagnosis and knowledge discovery from exome sequencing data

Computers in Biology and Medicine

Mona Shojaei

Navid Mohammadvand

Tunca Doğan

Can Alkan

Rengül Çetin Atalay

...

2024/2/1

SELFormer: Molecular Representation Learning via SELFIES Language Models

Machine Learning: Science and Technology

Atakan Yüksel

Erva Ulusoy

Atabey Ünlü

Tunca Doğan

2023/4/10

Target Specific De Novo Design of Drug Candidate Molecules with Graph Transformer-based Generative Adversarial Networks

arXiv preprint arXiv:2302.07868

Atabey Ünlü

Elif Çevrim

Ahmet Sarıgün

Hayriye Çelikbilek

Heval Ataş Güvenilir

...

2023/2/15

How to approach machine learning-based prediction of drug/compound–target interactions

Journal of Cheminformatics

Heval Atas Guvenilir

Tunca Doğan

2023/2/6

ASCARIS: Positional feature annotation and protein structure-based representation of single amino acid variations

Computational and Structural Biotechnology Journal

Fatma Cankara

Tunca Doğan

2023/10/4

ProFAB–Open Protein Functional Annotation Benchmark

Briefings in Bioinformatics

A Samet Özdilek

Ahmet Atakan

Gökhan Özsarı

Aybar Acar

M Volkan Atalay

...

2023/2/3

Democratizing knowledge representation with BioCypher

Nature Biotechnology

Sebastian Lobentanzer

Patrick Aloy

Jan Baumbach

Balazs Bohar

Vincent J Carey

...

2023/8

UniProt: the Universal Protein knowledgebase in 2023

Nucleic acids research

2021/1/8

Transfer learning for drug–target interaction prediction

Bioinformatics

Alperen Dalkıran

Ahmet Atakan

Ahmet S Rifaioğlu

Maria J Martin

Rengül Çetin Atalay

...

2023/6/1

Machine learning-based prediction of drug approvals using molecular, physicochemical, clinical trial and patent related features

Fulya Ciray

Tunca Doğan

2022/12

A Multi-Omics and Machine Learning-Based Predictor of Drug Sensitivity in Cancer

15th International Symposium on Health Informatics and Bioinformatics HIBIT’22 (20-22 October 2022)

Umut Onur Ozcan

Navid Mohammadvand

Burakcan Izmirli

Etkin Akar

Deniz Cansen Kahraman

...

2022

A Protein Representation Model for Low-Data Protein Function Prediction

15th International Symposium on Health Informatics and Bioinformatics HIBIT’22 (20-22 October 2022)

Serbulent Unsal

Sinem Özdemir

Işık Özdinç

Amine Bayraklı

Muammer Albayrak

...

2022

Mutual Annotation-Based Prediction of Protein Domain Functions with Domain2GO

bioRxiv

Erva Ulusoy

Tunca Doğan

2022/11/4

Machine learning-based prediction of survival in cancer using multi-omics data

15th International Symposium on Health Informatics and Bioinformatics HIBIT’22 (20-22 October 2022)

Ayşe Nur Çoruh

Tunca Doğan

2022

SLPred: A Multi-view Subcellular Localization Prediction Tool for Multi-location Human Proteins

Bioinformatics

Gökhan Özsarı

Ahmet Sureyya Rifaioglu

Ahmet Atakan

Tunca Doğan

Maria Jesus Martin

...

2022/9/1

Disease Centric Large Scale De Novo Design of Drug Candidate Molecules with Graph Generative Deep Adversarial Networks

15th International Symposium on Health Informatics and Bioinformatics HIBIT’22 (20-22 October 2022)

Atabey Ünlü

Elif Çevrim

Ahmet Sarıgün

Heval Ataş

Altay Koyaş

...

2022

Learning functional properties of proteins with language models

Nature Machine Intelligence

Serbulent Unsal

Heval Atas

Muammer Albayrak

Kemal Turhan

Aybar C Acar

...

2022/3

Hnet-DTI: Incorporating heterogeneous information network for drug-target interaction prediction

15th International Symposium on Health Informatics and Bioinformatics HIBIT’22 (20-22 October 2022)

Gökhan Özsarı

Ahmet Süreyya Rifaioğlu

Tunca Doğan

Volkan Atalay

2022

Crowdsourced mapping of unexplored target space of kinase inhibitors

Nature communications

Anna Cichońska

Balaguru Ravikumar

Robert J Allaway

Fangping Wan

Sungjoon Park

...

2021/6/3

Machine Learning Methodologies To Study Molecular Interactions

Frontiers in Molecular Biosciences

Artur Yakimovich

Arzucan Özgür

Tunca Doğan

Elif Ozkirimli

2021/12/3

See List of Professors in Tunca Dogan University(Hacettepe Üniversitesi)

Co-Authors

H-index: 78
Cathy Wu

Cathy Wu

University of Delaware

H-index: 45
Dr. Chuming Chen

Dr. Chuming Chen

University of Delaware

H-index: 43
Cecilia Arighi

Cecilia Arighi

University of Delaware

H-index: 25
M. Volkan Atalay

M. Volkan Atalay

Orta Dogu Teknik Üniversitesi

H-index: 14
Deniz Cansen Kahraman

Deniz Cansen Kahraman

Orta Dogu Teknik Üniversitesi

H-index: 11
Ahmet Sureyya Rifaioglu

Ahmet Sureyya Rifaioglu

Orta Dogu Teknik Üniversitesi

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