Tomáš Brůna
Georgia Institute of Technology
H-index: 6
North America-United States
Top articles of Tomáš Brůna
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
Navigating Eukaryotic Genome Annotation Pipelines: A Route Map to BRAKER, Galba, and TSEBRA | arXiv preprint arXiv:2403.19416 | Tomáš Brůna Lars Gabriel Katharina J Hoff | 2024/3/28 |
The first two chromosome‐scale genome assemblies of American hazelnut enable comparative genomic analysis of the genus Corylus | Plant Biotechnology Journal | Scott H Brainard Dean M Sanders Tomas Bruna Shengqiang Shu Julie C Dawson | 2024/2 |
GeneMark-ETP: automatic gene finding in eukaryotic genomes in consistency with extrinsic data | BioRxiv | Tomas Bruna Alexandre Lomsadze Mark Borodovsky | 2023/1/15 |
The BRAKER3 genome annotation pipeline | Plant and Animal Genomes Conference | Lars Gabriel Katharina J Hoff Tomáš Bruna Alexandre Lomsadze Mark Borodovsky | 2023/1/15 |
Galba: genome annotation with miniprot and AUGUSTUS | BMC bioinformatics | Tomáš Brůna Heng Li Joseph Guhlin Daniel Honsel Steffen Herbold | 2023/8/31 |
BRAKER3: Fully automated genome annotation using RNA-Seq and protein evidence with GeneMark-ETP, AUGUSTUS and TSEBRA | Biorxiv | Lars Gabriel Tomáš Brůna Katharina J Hoff Matthis Ebel Alexandre Lomsadze | 2023/6/12 |
A chromosome-length genome assembly and annotation of blackberry (Rubus argutus, cv. “Hillquist”) | G3 | Tomáš Brůna Rishi Aryal Olga Dudchenko Daniel James Sargent Daniel Mead | 2023/2/1 |
Unsupervised algorithms for automated gene prediction in novel eukaryotic genomes | Tomas Bruna | 2022/7/29 | |
Disproportionate presence of adenosine in mitochondrial and chloroplast DNA of Chlamydomonas reinhardtii | Iscience | Waleed MM El-Sayed Alli L Gombolay Penghao Xu Taehwan Yang Youngkyu Jeon | 2021/1/22 |
TSEBRA: transcript selector for BRAKER | Bmc Bioinformatics | Lars Gabriel Katharina J Hoff Tomáš Brůna Mark Borodovsky Mario Stanke | 2021/12 |
BRAKER2: automatic eukaryotic genome annotation with GeneMark-EP+ and AUGUSTUS supported by a protein database | NAR genomics and bioinformatics | Tomáš Brůna Katharina J Hoff Alexandre Lomsadze Mario Stanke Mark Borodovsky | 2021/3 |
GeneMark-EP+: eukaryotic gene prediction with self-training in the space of genes and proteins | NAR genomics and bioinformatics | Tomáš Brůna Alexandre Lomsadze Mark Borodovsky | 2020/6 |
Co-Authors
