Sudhir Kumar
Temple University
H-index: 86
North America-United States
Top articles of Sudhir Kumar
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
Split-Transformer Impute (STI): Genotype Imputation Using a Transformer-Based Model | bioRxiv | Mohammad Erfan Mowlaei Chong Li Junjie Chen Benyamin Jamialahmadi Sudhir Kumar | 2023/3/6 |
Protein dynamics provide mechanistic insights about epistasis among common missense polymorphisms | Biophysical Journal | Nicholas J Ose Paul Campitelli Ravi Patel Sudhir Kumar S Banu Ozkan | 2023/2 |
Molecular timetrees using relaxed clocks and uncertain phylogenies | Frontiers in Bioinformatics | Jose Barba-Montoya Sudip Sharma Sudhir Kumar | 2023 |
Discovering research articles containing evolutionary timetrees by machine learning | Bioinformatics | Marija Stanojevic Jovan Andjelkovic Adrienne Kasprowicz Louise A. Huuki Jennifer Chao | 2023/1/16 |
Masatoshi Nei (1931–2023) | Nature Ecology & Evolution | Jianzhi Zhang Sudhir Kumar | 2023/9 |
Molecular evidence for SARS-CoV-2 in samples collected from patients with morbilliform eruptions since late 2019 in Lombardy, northern Italy | Environmental Research | Antonella Amendola Marta Canuti Silvia Bianchi Sudhir Kumar Clara Fappani | 2022/12/1 |
TopHap: rapid inference of key phylogenetic structures from common haplotypes in large genome collections with limited diversity | Bioinformatics | Marcos A Caraballo-Ortiz Sayaka Miura Maxwell Sanderford Tenzin Dolker Qiqing Tao | 2022/5/15 |
Waiting for the truth: is reluctance in accepting an early origin hypothesis for SARS-CoV-2 delaying our understanding of viral emergence? | Marta Canuti Silvia Bianchi Otto Kolbl Sergei L Kosakovsky Pond Sudhir Kumar | 2022/3/1 | |
Taming the selection of optimal substitution models in Phylogenomics by site subsampling and upsampling | Molecular Biology and Evolution | Sudip Sharma Sudhir Kumar | 2022/11 |
Embracing green computing in molecular phylogenetics | Sudhir Kumar | 2022/3/1 | |
Epistasis creates invariant sites and modulates the rate of molecular evolution | Molecular Biology and Evolution | Ravi Patel Vincenzo Carnevale Sudhir Kumar | 2022/5/1 |
Clone phylogenetics reveals metastatic tumor migrations, maps, and models | A Chroni S Miura L Hamilton T Vu SG Gaffney | 2022 | |
TimeTree 5: an expanded resource for species divergence times | Molecular biology and evolution | Sudhir Kumar Michael Suleski Jack M Craig Adrienne E Kasprowicz Maxwell Sanderford | 2022/8/1 |
Dynamic coupling of residues within proteins as a mechanistic foundation of many enigmatic pathogenic missense variants | PLoS computational biology | Nicholas J Ose Brandon M Butler Avishek Kumar I Can Kazan Maxwell Sanderford | 2022/4/7 |
Storyboarding for Biology: An Authentic STEAM Experience | The American Biology Teacher | Caryn Babaian Sudhir Kumar | 2022/8/1 |
MOCA for Integrated Analysis of Gene Expression and Genetic Variation in Single Cells | Frontiers in Genetics | Jared Huzar Hannah Kim Sudhir Kumar Sayaka Miura | 2022/3/31 |
A phylogenetic approach to study the evolution of somatic mutational processes in cancer | Communications Biology | Sayaka Miura Tracy Vu Jiyeong Choi Jeffrey P Townsend Sajjad Karim | 2022/6/22 |
Limitations of phylogenomic data can drive inferred speciation rate shifts | Molecular Biology and Evolution | Jack M Craig Sudhir Kumar S Blair Hedges | 2022/3/1 |
Assessing rapid relaxed-clock methods for phylogenomic dating | Genome Biology and Evolution | Jose Barba-Montoya Qiqing Tao Sudhir Kumar | 2021/11/1 |
An evolutionary portrait of the progenitor SARS-CoV-2 and its dominant offshoots in COVID-19 pandemic | Molecular Biology and Evolution | Sudhir Kumar Qiqing Tao Steven Weaver Maxwell Sanderford Marcos A Caraballo-Ortiz | 2021/8/1 |
Co-Authors
