Stephen D. Fried

Stephen D. Fried

Johns Hopkins University

H-index: 23

North America-United States

About Stephen D. Fried

Stephen D. Fried, With an exceptional h-index of 23 and a recent h-index of 21 (since 2020), a distinguished researcher at Johns Hopkins University, specializes in the field of Synthetic biology, biophysics, molecular evolution.

His recent articles reflect a diverse array of research interests and contributions to the field:

Proteome-wide DnaK binding-sites in E. coli and Mycobacterium tuberculosis

Circular RNA engineering for the secretory production of long repetitive peptide materials

Investigating protein structural changes associated with cognitive decline in a rodent model of aging using limited proteolysis mass spectrometry

In vitro reconstitution of the C. elegans synaptonemal complex

Tracing the close and distant evolutionary relationships of protein refoldability in firmicutes

Synonymous mutations can alter protein dimerization through localized interface misfolding involving self-entanglements

FkpA enhances outer membrane protein folding using an extensive interaction interface

Examination of aging-related loss of proteostasis in yeast with limited proteolysis mass spectrometry

Stephen D. Fried Information

University

Position

Assistant Professor

Citations(all)

2838

Citations(since 2020)

1969

Cited By

1610

hIndex(all)

23

hIndex(since 2020)

21

i10Index(all)

31

i10Index(since 2020)

26

Email

University Profile Page

Johns Hopkins University

Google Scholar

View Google Scholar Profile

Stephen D. Fried Skills & Research Interests

Synthetic biology

biophysics

molecular evolution

Top articles of Stephen D. Fried

Title

Journal

Author(s)

Publication Date

Proteome-wide DnaK binding-sites in E. coli and Mycobacterium tuberculosis

Biophysical Journal

Sreemantee Sen

Edgar Manriquez-Sandoval

Sterling Sandler

Tania Lupoli

Stephen D Fried

2024/2/8

Circular RNA engineering for the secretory production of long repetitive peptide materials

Biophysical Journal

Qi Xie

Stephen D Fried

2024/2/8

Investigating protein structural changes associated with cognitive decline in a rodent model of aging using limited proteolysis mass spectrometry

Biophysical Journal

Haley E Tarbox

Audrey Branch

Michela Gallagher

Stephen D Fried

2024/2/8

In vitro reconstitution of the C. elegans synaptonemal complex

Biophysical Journal

Brenda I Cesar

Divya Yadav

Stephen D Fried

Yumi Kim

2024/2/8

Tracing the close and distant evolutionary relationships of protein refoldability in firmicutes

Biophysical Journal

Edgar Manriquez-Sandoval

Stephen D Fried

2024/2/8

Synonymous mutations can alter protein dimerization through localized interface misfolding involving self-entanglements

Journal of Molecular Biology

Pham Dang Lan

Daniel Allen Nissley

Ian Sitarik

Quyen V Vu

Yang Jiang

...

2024/2/9

FkpA enhances outer membrane protein folding using an extensive interaction interface

Biophysical Journal

Taylor A Devlin

Dagan C Marx

Anneliese Faustino

Michaela Roskopf

Stephen D Fried

...

2024/2/8

Examination of aging-related loss of proteostasis in yeast with limited proteolysis mass spectrometry

Biophysical Journal

Neil B Wood

Haley E Tarbox

Stephen D Fried

2024/2/8

Progress toward proteome-wide photo-crosslinking mass spectrometry to interrogate protein networks in vivo

Biophysical Journal

Anneliese M Faustino

Stephen D Fried

2024/2/8

Early selection of the amino acid alphabet was adaptively shaped by biophysical constraints of foldability

Journal of the American Chemical Society

Mikhail Makarov

Alma C Sanchez Rocha

Robin Krystufek

Ivan Cherepashuk

Volha Dzmitruk

...

2023/2/24

Extremophilic proteome refoldability studies reveal distinct biophysical strategies to protect protein structure in vivo

Biophysical Journal

Haley M Moran

Marie Pearce

Matthew Isada

Ernesto Alvarez

Leeker Lin

...

2023/2/10

Lowering Activation Barriers to Success in Physical Chemistry (LABSIP): A Community Project

The Journal of Physical Chemistry A

Carlos R Baiz

Robert F Berger

Kelling J Donald

Julio C de Paula

Stephen D Fried

...

2023/12/19

Resisting desiccation: A proteomic-scale analysis

Biophysical Journal

P Sofia Romero-Perez

Haley M Moran

Stephen D Fried

Shahar Sukenik

2023/2/10

Secretion‐Catalyzed Assembly of Protein Biomaterials on a Bacterial Membrane Surface

Angewandte Chemie International Edition

Qi Xie

Sea On Lee

Nitya Vissamsetti

Sikao Guo

Margaret E Johnson

...

2023/9/11

FLiPPR: A Processor for Limited Proteolysis (LiP) Mass Spectrometry Datasets Built on FragPipe

bioRxiv

Edgar Manriquez-Sandoval

Joy Brewer

Gabriela Lule

Samanta Lopez

Stephen D Fried

2023

Progress toward Proteome-Wide Photo-Cross-Linking to Enable Residue-Level Visualization of Protein Structures and Networks In Vivo

Analytical Chemistry

Anneliese M Faustino

Piyoosh Sharma

Edgar Manriquez-Sandoval

Divya Yadav

Stephen D Fried

2023/6/21

Intrinsically disordered regions promote protein refoldability and facilitate retrieval from biomolecular condensates

bioRxiv

Philip To

Atharva M Bhagwat

Haley E Tarbox

Ayse Ecer

Hannah Wendorff

...

2023

How synonymous mutations alter enzyme structure and function over long timescales

Nature Chemistry

Yang Jiang

Syam Sundar Neti

Ian Sitarik

Priya Pradhan

Philip To

...

2023/3

Protein Refoldability Traces the Transition from Peptides to the Earliest Proteins

The Astrobiology Science Conference (AbSciCon) 2022

Stephen David Fried

Philip To

Klara Hlouchova

Kosuke Fujishima

2022/5

A proteome-wide map of chaperone-assisted protein refolding in a cytosol-like milieu

Proceedings of the National Academy of Sciences

Philip To

Yingzi Xia

Sea On Lee

Taylor Devlin

Karen G Fleming

...

2022/11/29

See List of Professors in Stephen D. Fried University(Johns Hopkins University)

Co-Authors

H-index: 117
Vijay Pande

Vijay Pande

Stanford University

H-index: 29
Aaron Fafarman

Aaron Fafarman

Drexel University

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