Stefan Hoops

Stefan Hoops

University of Virginia

H-index: 30

North America-United States

About Stefan Hoops

Stefan Hoops, With an exceptional h-index of 30 and a recent h-index of 21 (since 2020), a distinguished researcher at University of Virginia, specializes in the field of Systems Biology Standards, Modeling, Simulation, Software and algorithm Development.

His recent articles reflect a diverse array of research interests and contributions to the field:

Potential impact of annual vaccination with reformulated COVID-19 vaccines: lessons from the US COVID-19 Scenario Modeling Hub

A Large-Scale Epidemic Simulation Framework for Realistic Social Contact Networks

Active Sensing for Epidemic State Estimation Using ABM-guided Machine Learning

Evaluation of the US COVID-19 Scenario Modeling Hub for informing pandemic response under uncertainty

Data-driven scalable pipeline using national agent-based models for real-time pandemic response and decision support

Synthetic Information and Digital Twins for Pandemic Science: Challenges and Opportunities

Impact of SARS-CoV-2 vaccination of children ages 5–11 years on COVID-19 disease burden and resilience to new variants in the United States, November 2021–March 2022: A multi …

Augmenting the Social Vulnerability Index using an agent-based simulation of Hurricane Harvey

Stefan Hoops Information

University

Position

Research Associate Professor Biocomplexity Institute & Initiative

Citations(all)

5955

Citations(since 2020)

2624

Cited By

4234

hIndex(all)

30

hIndex(since 2020)

21

i10Index(all)

51

i10Index(since 2020)

38

Email

University Profile Page

University of Virginia

Google Scholar

View Google Scholar Profile

Stefan Hoops Skills & Research Interests

Systems Biology Standards

Modeling

Simulation

Software and algorithm Development

Top articles of Stefan Hoops

Title

Journal

Author(s)

Publication Date

Potential impact of annual vaccination with reformulated COVID-19 vaccines: lessons from the US COVID-19 Scenario Modeling Hub

PLoS medicine

Sung-mok Jung

Sara L Loo

Emily Howerton

Lucie Contamin

Claire P Smith

...

2024/4/17

A Large-Scale Epidemic Simulation Framework for Realistic Social Contact Networks

arXiv preprint arXiv:2401.08124

Joy Kitson

Ian Costello

Jiangzhuo Chen

Diego Jiménez

Stefan Hoops

...

2024/1/16

Active Sensing for Epidemic State Estimation Using ABM-guided Machine Learning

Proceedings of the Multi-agent-based Simulation (MABS) Workshop

Sami Saliba

Faraz Dadgostari

Stefan Hoops

Henning S Mortveit

Samarth Swarup

2023

Evaluation of the US COVID-19 Scenario Modeling Hub for informing pandemic response under uncertainty

Nature communications

Emily Howerton

Lucie Contamin

Luke C Mullany

Michelle Qin

Nicholas G Reich

...

2023/11/20

Data-driven scalable pipeline using national agent-based models for real-time pandemic response and decision support

The International Journal of High Performance Computing Applications

Parantapa Bhattacharya

Jiangzhuo Chen

Stefan Hoops

Dustin Machi

Bryan Lewis

...

2023/1

Synthetic Information and Digital Twins for Pandemic Science: Challenges and Opportunities

Galen Harrison

Przemyslaw Porebski

Jiangzhuo Chen

Mandy Wilson

Henning Mortveit

...

2023/11/1

Impact of SARS-CoV-2 vaccination of children ages 5–11 years on COVID-19 disease burden and resilience to new variants in the United States, November 2021–March 2022: A multi …

The Lancet Regional Health–Americas

Rebecca K Borchering

Luke C Mullany

Emily Howerton

Matteo Chinazzi

Claire P Smith

...

2023/1/1

Augmenting the Social Vulnerability Index using an agent-based simulation of Hurricane Harvey

Computers, Environment and Urban Systems

Anna E Brower

Balaji Ramesh

Kazi Ashik Islam

Henning S Mortveit

Stefan Hoops

...

2023/10/1

Informing pandemic response in the face of uncertainty. An evaluation of the US COVID-19 Scenario Modeling Hub

medRxiv

Emily Howerton

Lucie Contamin

Luke C Mullany

Michelle Qin

Nicholas G Reich

...

2023/7/3

Ten Billion Events in Three Minutes: Scaling an Agent-basedEpidemic Simulation on Realistic Social Contact Networks

J Kitson

I Costello

J Chen

S Hoops

E Meneses

...

2023/4/5

BioSimulators: a central registry of simulation engines and services for recommending specific tools

Nucleic acids research

Bilal Shaikh

Lucian P Smith

Dan Vasilescu

Gnaneswara Marupilla

Michael Wilson

...

2022/7/5

Projected resurgence of COVID-19 in the United States in July—December 2021 resulting from the increased transmissibility of the Delta variant and faltering vaccination

Elife

Shaun Truelove

Claire P Smith

Michelle Qin

Luke C Mullany

Rebecca K Borchering

...

2022/6/21

COVID’s collateral damage: likelihood of measles resurgence in the United States

BMC Infectious Diseases

Mugdha Thakur

Richard Zhou

Mukundan Mohan

Achla Marathe

Jiangzhuo Chen

...

2022/12

Effective social network-based allocation of covid-19 vaccines

Jiangzhuo Chen

Stefan Hoops

Achla Marathe

Henning Mortveit

Bryan Lewis

...

2022/8/14

Scalable epidemiological workflows to support covid-19 planning and response

Dustin Machi

Parantapa Bhattacharya

Stefan Hoops

Jiangzhuo Chen

Henning Mortveit

...

2021/5/17

Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research

Franziska Hufsky

Kevin Lamkiewicz

Alexandre Almeida

Abdel Aouacheria

Cecilia Arighi

...

2021/3

Prioritizing allocation of COVID-19 vaccines based on social contacts increases vaccination effectiveness

MedRxiv

Jiangzhuo Chen

Stefan Hoops

Achla Marathe

Henning Mortveit

Bryan Lewis

...

2021/2/6

Ai-driven agent-based models to study the role of vaccine acceptance in controlling covid-19 spread in the us

Parantapa Bhattacharya

Dustin Machi

Jiangzhuo Chen

Stefan Hoops

Bryan Lewis

...

2021/12/15

High performance agent-based modeling to study realistic contact tracing protocols

Stefan Hoops

Jiangzhuo Chen

Abhijin Adiga

Bryan Lewis

Henning Mortveit

...

2021/12/12

Epidemiological and economic impact of COVID-19 in the US

Scientific reports

Jiangzhuo Chen

Anil Vullikanti

Joost Santos

Srinivasan Venkatramanan

Stefan Hoops

...

2021/10/14

See List of Professors in Stefan Hoops University(University of Virginia)

Co-Authors

H-index: 75
John J. Tyson

John J. Tyson

Virginia Polytechnic Institute and State University

H-index: 59
Pedro Mendes

Pedro Mendes

University of Connecticut

H-index: 46
Michael Hucka

Michael Hucka

California Institute of Technology

H-index: 40
Clifford A. Shaffer

Clifford A. Shaffer

Virginia Polytechnic Institute and State University

H-index: 39
Darren Wilkinson

Darren Wilkinson

Newcastle University

H-index: 32
Vida Abedi

Vida Abedi

Virginia Polytechnic Institute and State University

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