Sophia Tsoka

Sophia Tsoka

King's College

H-index: 37

North America-United States

About Sophia Tsoka

Sophia Tsoka, With an exceptional h-index of 37 and a recent h-index of 24 (since 2020), a distinguished researcher at King's College, specializes in the field of Bioinformatics.

His recent articles reflect a diverse array of research interests and contributions to the field:

CLigOpt: Controllable Ligand Design through Target-Specific Optimisation

Optimisation-based modelling for explainable lead discovery in malaria

Anti-cancer pro-inflammatory effects of an IgE antibody targeting the melanoma-associated antigen chondroitin sulfate proteoglycan 4

Weakly supervised segmentation models as explainable radiological classifiers for lung tumour detection on CT images

Optimisation models for pathway activity inference in cancer

Human skin CD141+ dendritic cells regulate cutaneous immunity via the neuropeptide urocortin 2

Folate receptor alpha in ovarian cancer tissue and patient serum is associated with disease burden and treatment outcomes

Incorporating Prior Knowledge in Deep Learning Models via Pathway Activity Autoencoders

Sophia Tsoka Information

University

Position

___

Citations(all)

6373

Citations(since 2020)

2422

Cited By

4849

hIndex(all)

37

hIndex(since 2020)

24

i10Index(all)

70

i10Index(since 2020)

42

Email

University Profile Page

King's College

Google Scholar

View Google Scholar Profile

Sophia Tsoka Skills & Research Interests

Bioinformatics

Top articles of Sophia Tsoka

Title

Journal

Author(s)

Publication Date

CLigOpt: Controllable Ligand Design through Target-Specific Optimisation

bioRxiv

Yutong Li

Pedro Henrique da Costa Avelar

Xinyue Chen

Li Zhang

Min Wu

...

2024/3/17

Optimisation-based modelling for explainable lead discovery in malaria

Artificial intelligence in medicine

Yutong Li

Jonathan Cardoso-Silva

John M Kelly

Michael J Delves

Nicholas Furnham

...

2024/1/1

Anti-cancer pro-inflammatory effects of an IgE antibody targeting the melanoma-associated antigen chondroitin sulfate proteoglycan 4

Nature Communications

Jitesh Chauhan

Melanie Grandits

Lais CGF Palhares

Silvia Mele

Mano Nakamura

...

2023/4/25

Weakly supervised segmentation models as explainable radiological classifiers for lung tumour detection on CT images

Insights into imaging

Robert O’Shea

Thubeena Manickavasagar

Carolyn Horst

Daniel Hughes

James Cusack

...

2023/11/19

Optimisation models for pathway activity inference in cancer

Cancers

Yongnan Chen

Songsong Liu

Lazaros G Papageorgiou

Konstantinos Theofilatos

Sophia Tsoka

2023/3/15

Human skin CD141+ dendritic cells regulate cutaneous immunity via the neuropeptide urocortin 2

Iscience

Prudence PokWai Lui

Chrysanthi Ainali

Chung-Ching Chu

Manuela Terranova-Barberio

Panagiotis Karagiannis

...

2023/10/20

Folate receptor alpha in ovarian cancer tissue and patient serum is associated with disease burden and treatment outcomes

British Journal of Cancer

Heather J Bax

Jitesh Chauhan

Chara Stavraka

Aida Santaolalla

Gabriel Osborn

...

2023/1/19

Incorporating Prior Knowledge in Deep Learning Models via Pathway Activity Autoencoders

arXiv preprint arXiv:2306.05813

Pedro Henrique da Costa Avelar

Min Wu

Sophia Tsoka

2023/6/9

B cell profiles, antibody repertoire and reactivity reveal dysregulated responses with autoimmune features in melanoma

Nature communications

Silvia Crescioli

Isabel Correa

Joseph Ng

Zena N Willsmore

Roman Laddach

...

2023/6/8

Drug repurposing and prediction of multiple interaction types via graph embedding

BMC bioinformatics

E Amiri Souri

Alicia Chenoweth

Sophia N Karagiannis

Sophia Tsoka

2023/5/17

TIGIT blockade repolarizes AML-associated TIGIT+ M2 macrophages to an M1 phenotype and increases CD47-mediated phagocytosis

Journal for immunotherapy of cancer

Franziska Brauneck

Brit Fischer

Marius Witt

Jana Muschhammer

Jennyfer Oelrich

...

2022

Weakly supervised Unet: an image classifier which learns to explain itself

BioRxiv

Robert John O’Shea

Carolyn Horst

Thubeena Manickavasagar

Daniel Hughes

James Cusack

...

2022/9/12

Predicting COVID-19 Patients Outcome Trajectories Using Proteomics and Clinical Biosignatures: A Comprehensive Machine Learning and Bioinformatics Approach

Available at SSRN 4272571

Edoardo Pona

Nishaanth Elango

Bowen Zheng

Alexis Dumon

Sophia Tsoka

...

2022/11/9

Radiomic assessment of oesophageal adenocarcinoma: a critical review of 18F-FDG PET/CT, PET/MRI and CT

Robert J O’Shea

Chris Rookyard

Sam Withey

Gary JR Cook

Sophia Tsoka

...

2022/6/17

A Bayesian predictive analytics model for improving long range epidemic forecasting during an infection wave

Healthcare Analytics

Pedro Henrique da Costa Avelar

Natalia Del Coco

Luis C Lamb

Sophia Tsoka

Jonathan Cardoso-Silva

2022/11/1

Influence of FLG loss-of-function mutations in host–microbe interactions during atopic skin inflammation

Journal of Dermatological Science

Peter Oláh

Eszter Szlávicz

Marcus Kuchner

Jana Nemmer

Patrick Zeeuwen

...

2022/6/1

Design and manufacture of a lyophilised faecal microbiota capsule formulation to GMP standards

Journal of Controlled Release

Nur Masirah M Zain

Danielle Ter Linden

Andrew K Lilley

Paul G Royall

Sophia Tsoka

...

2022/10/1

Transcriptome‐based identification of novel endotypes in adult atopic dermatitis

Allergy

Alain Lefèvre‐Utile

Melissa Saichi

Péter Oláh

Marc Delord

Bernhard Homey

...

2021/10

A Matrix Factorization-Based Drug-Virus Link Prediction Method for SARS-CoV-2 Drug Prioritization

Yutong Li

Xiaorui Xu

Sophia Tsoka

2022/9/19

Influencing tumor-associated macrophages in malignant melanoma with monoclonal antibodies

Rebecca Adams

Gabriel Osborn

Bipashna Mukhia

Roman Laddach

Zena Willsmore

...

2022/12/31

See List of Professors in Sophia Tsoka University(King's College)

Co-Authors

H-index: 248
Tim D Spector

Tim D Spector

King's College

H-index: 118
Russ B Altman

Russ B Altman

Stanford University

H-index: 49
Sophia N Karagiannis

Sophia N Karagiannis

King's College London

H-index: 41
Iwei Yeh

Iwei Yeh

University of California, San Francisco

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