Sergey Aganezov
Johns Hopkins University
H-index: 15
North America-United States
Top articles of Sergey Aganezov
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
Haplotype-resolved analysis of cancer genomes and epigenomes using Oxford Nanopore sequencing | Cancer Research | Philipp Rescheneder Phill James Sean McKenzie Andrea Talenti Sergey Aganezov | 2024/3/22 |
Native nanopore sequencing of multiple tumor sites reveals genetic and epigenetic intra-tumor heterogeneity in canine osteosarcoma | Cancer Research | Ayse Keskus Sergey Aganezov Tanveer Ahmad Xiaoguang Dai Robert Walker | 2024/3/22 |
Severus: accurate detection and characterization of somatic structural variation in tumor genomes using long reads | medRxiv | Ayse Keskus Asher Bryant Tanveer Ahmad Byunggil Yoo Sergey Aganezov | 2024 |
The EN-TEx resource of multi-tissue personal epigenomes & variant-impact models | Cell | Joel Rozowsky Jiahao Gao Beatrice Borsari Yucheng T Yang Timur Galeev | 2023/3/30 |
Jasmine and Iris: population-scale structural variant comparison and analysis | Nature methods | Melanie Kirsche Gautam Prabhu Rachel Sherman Bohan Ni Alexis Battle | 2023/3 |
MethPhaser: methylation-based haplotype phasing of human genomes | bioRxiv | Yilei Fu Sergey Aganezov Medhat Mahmoud John Beaulaurier Sissel Juul | 2023 |
A complete reference genome improves short-read analysis of human genetic variation | GENOMIC VARIANT CALLING AT SCALE ACROSS HUMAN POPULATIONS | CHM13 over GRCh38 Sergey Nurk Sergey Koren Arang Rhie Mikko Rautiainen | 2023/6 |
Abstract LB081: Concurrent characterization of somatic nucleotide mutations, 5mC, and 5hmC methylation in clinical research samples using a single nanopore sequencing assay | Cancer Research | Sergey Aganezov Philipp Rescheneder John Beaulaurier Phillip James Sissel Juul | 2023/4/14 |
Resolving clone-and haplotype-specific copy number variation and DNA methylation in heterogeneous tumors with nanopore sequencing | Cancer Research | Sergey Aganezov John Beaulaurier Eoghan Harrington Sissel Juul | 2022/6/15 |
A complete reference genome improves analysis of human genetic variation | Science | Sergey Aganezov Stephanie M Yan Daniela C Soto Melanie Kirsche Samantha Zarate | 2022/4/1 |
Orienting Ordered Scaffolds: Complexity and Algorithms | SN Computer Science | Sergey Aganezov Pavel Avdeyev Nikita Alexeev Yongwu Rong Max A Alekseyev | 2022/5/26 |
The complete sequence of a human genome | Science | Sergey Nurk Sergey Koren Arang Rhie Mikko Rautiainen Andrey V Bzikadze | 2022/4/1 |
Chromothripsis Rearrangements Are Informed by 3D-Genome Organization | Natalia Petukhova Alexey Zabelkin Vitaly Dravgelis Sergey Aganezov Nikita Alexeev | 2022/5/15 | |
A complete reference genome improves long-read analysis of human genetic variation | COMPUTATIONAL METHODS FOR STRUCTURAL VARIATION ANALYSIS IN POPULATIONS | Sergey Aganezov Stephanie M Yan Daniela C Soto Melanie Kirsche Samantha Zarate | 2022/3 |
Automated assembly scaffolding using RagTag elevates a new tomato system for high-throughput genome editing | Genome biology | Michael Alonge Ludivine Lebeigle Melanie Kirsche Katie Jenike Shujun Ou | 2022/12/15 |
Benchmarking challenging small variants with linked and long reads | Cell Genomics | Justin Wagner Nathan D Olson Lindsay Harris Ziad Khan Jesse Farek | 2022/5/11 |
Detection and assembly of extrachromosomal DNA in tumors with nanopore sequencing | Cancer Research | Sergey Aganezov John Beaulaurier Eoghan Harrington Sissel Juul | 2022/6/15 |
Complete genomic and epigenetic maps of human centromeres | Science | Nicolas Altemose Glennis A Logsdon Andrey V Bzikadze Pragya Sidhwani Sasha A Langley | 2022/4/1 |
Optimized sample selection for cost-efficient long-read population sequencing | Genome research | T Rhyker Ranallo-Benavidez Zachary Lemmon Sebastian Soyk Sergey Aganezov William J Salerno | 2021/5/1 |
Multi-tissue integrative analysis of personal epigenomes | BioRxiv | Joel Rozowsky Jorg Drenkow Yucheng Yang Gamze Gursoy Timur Galeev | 2021/4/26 |
Co-Authors
