Sebastian Otálora

Sebastian Otálora

Université de Genève

H-index: 17

Europe-Switzerland

About Sebastian Otálora

Sebastian Otálora, With an exceptional h-index of 17 and a recent h-index of 16 (since 2020), a distinguished researcher at Université de Genève, specializes in the field of machine learning, biomedical image analysis.

His recent articles reflect a diverse array of research interests and contributions to the field:

eva: Evaluation framework for pathology foundation models

Data-driven color augmentation for H&E stained images in computational pathology

Federated Learning on Heterogeneous Diffusion-Weighted Imaging Data for Acute Stroke Infarct Segmentation

Weighting schemes for federated learning in heterogeneous and imbalanced segmentation datasets

Unleashing the potential of digital pathology data by training computer-aided diagnosis models without human annotations

Multi-task deep learning for glaucoma detection from color fundus images

Stainlib: a python library for augmentation and normalization of histopathology H&E images

H&E-adversarial network: a convolutional neural network to learn stain-invariant features through Hematoxylin & Eosin regression

Sebastian Otálora Information

University

Position

PhD candidate University of Applied Sciences and Arts Western Switzerland

Citations(all)

969

Citations(since 2020)

883

Cited By

352

hIndex(all)

17

hIndex(since 2020)

16

i10Index(all)

27

i10Index(since 2020)

26

Email

University Profile Page

Université de Genève

Google Scholar

View Google Scholar Profile

Sebastian Otálora Skills & Research Interests

machine learning

biomedical image analysis

Top articles of Sebastian Otálora

Title

Journal

Author(s)

Publication Date

eva: Evaluation framework for pathology foundation models

Ioannis Gatopoulos

Nicolas Känzig

Roman Moser

Sebastian Otálora

2024

Data-driven color augmentation for H&E stained images in computational pathology

Journal of Pathology Informatics

Niccolò Marini

Sebastian Otalora

Marek Wodzinski

Selene Tomassini

Aldo Franco Dragoni

...

2023/1/1

Federated Learning on Heterogeneous Diffusion-Weighted Imaging Data for Acute Stroke Infarct Segmentation

Antoine Madrona

Sebastian Otálora

Elda Fischi-Gomez

Veronica Ravano

Bénédicte Maréchal

...

2023/4/18

Weighting schemes for federated learning in heterogeneous and imbalanced segmentation datasets

Sebastian Otálora

Jonathan Rafael-Patiño

Antoine Madrona

Elda Fischi-Gomez

Veronica Ravano

...

2022/9/18

Unleashing the potential of digital pathology data by training computer-aided diagnosis models without human annotations

NPJ digital medicine

Niccolò Marini

Stefano Marchesin

Sebastian Otálora

Marek Wodzinski

Alessandro Caputo

...

2022/7/22

Multi-task deep learning for glaucoma detection from color fundus images

Scientific Reports

Lucas Pascal

Oscar J Perdomo

Xavier Bost

Benoit Huet

Sebastian Otálora

...

2022/7/20

Stainlib: a python library for augmentation and normalization of histopathology H&E images

BioRxiv

Sebastian Otálora

Niccoló Marini

Damian Podareanu

Ruben Hekster

David Tellez

...

2022/5/18

H&E-adversarial network: a convolutional neural network to learn stain-invariant features through Hematoxylin & Eosin regression

Niccolo Marini

Manfredo Atzori

Sebastian Otálora

Stephane Marchand-Maillet

Henning Müller

2021

Multi-scale task multiple instance learning for the classification of digital pathology images with global annotations

Niccolo Marini

Sebastian Otálora

Francesco Ciompi

Gianmaria Silvello

Stefano Marchesin

...

2021/9/16

Semi-supervised learning with a teacher-student paradigm for histopathology classification: a resource to face data heterogeneity and lack of local annotations

Niccolò Marini

Sebastian Otálora

Henning Müller

Manfredo Atzori

2021

Learning interpretable pathology features by multi-task and adversarial training improves CNN generalization

arXiv preprint arXiv:2008.01478

Mara Graziani

Sebastian Otálora

Stéphane Marchand-Maillet

Henning Müller

Vincent Andrearczyk

2021/9/9

Multi_Scale_Tools: a python library to exploit multi-scale whole slide images

Frontiers in Computer Science

Niccolò Marini

Sebastian Otálora

Damian Podareanu

Mart van Rijthoven

Jeroen van der Laak

...

2021/8/9

Combining weakly and strongly supervised learning improves strong supervision in Gleason pattern classification

BMC Medical Imaging

Sebastian Otálora

Niccolò Marini

Henning Müller

Manfredo Atzori

2021/5/8

Classification of noisy free-text prostate cancer pathology reports using natural language processing

Anjani Dhrangadhariya

Sebastian Otálora

Manfredo Atzori

Henning Müller

2021/1/10

Semi-supervised training of deep convolutional neural networks with heterogeneous data and few local annotations: An experiment on prostate histopathology image classification

Medical image analysis

Niccolo Marini

Sebastian Otálora

Henning Müller

Manfredo Atzori

2021/10/1

Generalizing convolution neural networks on stain color heterogeneous data for computational pathology

Amjad Khan

Manfredo Atzori

Sebastian Otálora

Vincent Andrearczyk

Henning Müller

2020/3/16

Systematic comparison of deep learning strategies for weakly supervised Gleason grading

Sebastian Otálora

Manfredo Atzori

Amjad Khan

Oscar Jimenez-del-Toro

Vincent Andrearczyk

...

2020/3/16

Semi-weakly supervised learning for prostate cancer image classification with teacher-student deep convolutional networks

Sebastian Otálora

Niccolò Marini

Henning Müller

Manfredo Atzori

2020

Multimodal latent semantic alignment for automated prostate tissue classification and retrieval

Juan S Lara

Victor H Contreras O

Sebastián Otálora

Henning Müller

Fabio A González

2020/9/29

Learning Interpretable Microscopic Features of Tumor by Multi-task Adversarial CNNs to Improve Generalization

arXiv preprint arXiv:2008.01478

Mara Graziani

Sebastian Otálora

Stéphane Marchand-Maillet

Henning Muller

Vincent Andrearczyk

2020/8/4

See List of Professors in Sebastian Otálora University(Université de Genève)

Co-Authors

H-index: 85
Anant Madabhushi

Anant Madabhushi

Case Western Reserve University

H-index: 55
Jeroen van der Laak

Jeroen van der Laak

Radboud Universiteit

H-index: 53
Fabrice Meriaudeau

Fabrice Meriaudeau

Université de Bourgogne

H-index: 51
Fabio Gonzalez

Fabio Gonzalez

Universidad Nacional de Colombia

H-index: 36
Francesco Ciompi

Francesco Ciompi

Radboud Universiteit

H-index: 18
Angel Cruz-Roa

Angel Cruz-Roa

Universidad de los Llanos

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