Sandrine Dudoit
University of California, Berkeley
H-index: 68
North America-United States
Top articles of Sandrine Dudoit
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
Trajectory inference across multiple conditions with condiments | Nature Communications | Hector Roux de Bézieux Koen Van den Berge Kelly Street Sandrine Dudoit | 2024/1/27 |
HSA Adductomics Reveals Sex Differences in NHL Incidence and Possible Involvement of Microbial Translocation | Cancer Epidemiology, Biomarkers & Prevention | Hasmik Grigoryan Partow Imani Carlotta Sacerdote Giovanna Masala Sara Grioni | 2023/9/1 |
Guidance on Individualized Treatment Rule Estimation in High Dimensions | arXiv preprint arXiv:2306.16402 | Philippe Boileau Ning Leng Sandrine Dudoit | 2023/6/28 |
A nonparametric framework for treatment effect modifier discovery in high dimensions | arXiv preprint arXiv:2304.05323 | Philippe Boileau Ning Leng Nima S Hejazi Mark van der Laan Sandrine Dudoit | 2023/4/11 |
Cross-validated loss-based covariance matrix estimator selection in high dimensions | Journal of Computational and Graphical Statistics | Philippe Boileau Nima S Hejazi Mark J van der Laan Sandrine Dudoit | 2023/4/3 |
A Latent Activated Olfactory Stem Cell State Revealed by Single Cell Transcriptomic and Epigenomic Profiling | bioRxiv | Koen Van den Berge Hsin-Jung Chou Divya Kunda Davide Risso Kelly Street | 2023/10/31 |
One-carbon (folate) metabolism pathway at birth and risk of childhood acute lymphoblastic leukemia: A biomarker study in newborns | Cancers | Catherine Metayer Partow Imani Sandrine Dudoit Libby Morimoto Xiaomei Ma | 2023/2/5 |
A flexible approach for predictive biomarker discovery | Biostatistics | Philippe Boileau Nina Ting Qi Mark J van der Laan Sandrine Dudoit Ning Leng | 2023/10/1 |
Normalization benchmark of ATAC-seq datasets shows the importance of accounting for GC-content effects | Cell Reports Methods | Koen Van den Berge Hsin-Jung Chou Hector Roux de Bézieux Kelly Street Davide Risso | 2022/11/21 |
CALDERA: finding all significant de Bruijn subgraphs for bacterial GWAS | Bioinformatics | Hector Roux de Bézieux Leandro Lima Fanny Perraudeau Arnaud Mary Sandrine Dudoit | 2022/7 |
cvCovEst: Cross-validated covariance matrix estimator selection and evaluation inR | Journal of Open Source Software | Philippe Boileau Nima S Hejazi Brian Collica Mark J van der Laan Sandrine Dudoit | 2021/7/26 |
Untargeted metabolomics of newborn dried blood spots reveals sex-specific associations with pediatric acute myeloid leukemia | Leukemia research | Lauren Petrick Partow Imani Kelsi Perttula Yukiko Yano Todd Whitehead | 2021/7/1 |
Extending the HSA-Cys34-adductomics pipeline to modifications at Lys525 | Chemical Research in Toxicology | Hasmik Grigoryan Partow Imani Sandrine Dudoit Stephen M Rappaport | 2021/11/17 |
Klf5 establishes bi-potential cell fate by dual regulation of ICM and TE specification genes | Cell reports | Martin Kinisu Yong Jin Choi Claudia Cattoglio Ke Liu Hector Roux de Bezieux | 2021/11/9 |
A multimodal cell census and atlas of the mammalian primary motor cortex | Nature | Principal manuscript editors Analysis coordination Integrated data analysis Armand Ethan 42 Yao Zizhen 5 ATAC-seq data generation and processing Fang Rongxin 45 Hou Xiaomeng 10 Lucero Jacinta D. 18 Osteen Julia K. 18 Pinto-Duarte Antonio 18 Poirion Olivier 10 Preissl Sebastian 10 Wang Xinxin 10 97 97 Epi-retro-seq data generation and processing Dominguez Bertha 53 Ito-Cole Tony 1 Jacobs Matthew 1 Jin Xin 54 99 100 99 100 Lee Cheng-Ta 53 Lee Kuo-Fen 53 Miyazaki Paula Assakura 1 Pang Yan 1 Rashid Mohammad 1 Smith Jared B. 54 Vu Minh 1 Williams Elora 54 | 2021/10/7 |
A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex | Nature | Zizhen Yao Hanqing Liu Fangming Xie Stephan Fischer Ricky S Adkins | 2021/10/7 |
Untargeted adductomics of newborn dried blood spots identifies modifications to human serum albumin associated with childhood leukemia | Leukemia research | Yukiko Yano Courtney Schiffman Hasmik Grigoryan Josie Hayes William Edmands | 2020/1/1 |
Exploring high-dimensional biological data with sparse contrastive principal component analysis | Bioinformatics | Philippe Boileau Nima S Hejazi Sandrine Dudoit | 2019/1/1 |
Improving replicability in single-cell RNA-Seq cell type discovery | bioRxiv | Hector Roux de Bézieux Kelly Street Stephan Fischer Koen Van den Berge Rebecca Chance | 2020/1/1 |
Trajectory-based differential expression analysis for single-cell sequencing data | Nature communications | Koen Van den Berge Hector Roux de Bézieux Kelly Street Wouter Saelens Robrecht Cannoodt | 2020/3/5 |
