S. Chakra Chennubhotla

S. Chakra Chennubhotla

University of Pittsburgh

H-index: 30

North America-United States

About S. Chakra Chennubhotla

S. Chakra Chennubhotla, With an exceptional h-index of 30 and a recent h-index of 22 (since 2020), a distinguished researcher at University of Pittsburgh, specializes in the field of computational biology, computer vision, machine learning.

His recent articles reflect a diverse array of research interests and contributions to the field:

Predicting cancer recurrence from spatial multi-parameter cellular and subcellular imaging data

Segmentation-free analysis of multiplexed images with unbiased spatial analytics and explainable AI for predicting disease outcomes

Scalable and high precision context-guided segmentation of histological structures including ducts/glands and lumen, cluster of ducts/glands, and individual nuclei in whole …

Abstract P6-04-12: Differential diagnoses of breast biopsies by spatial parametric modeling of histological structures and explainable AI

# COVIDisAirborne: AI-enabled multiscale computational microscopy of delta SARS-CoV-2 in a respiratory aerosol

Explainable AI (xAI) platform for computational pathology

Parametric Modeling and Inference of Diagnostically Relevant Histological Patterns in Digitized Tissue Images

Systems and methods for finding regions of interest in hematoxylin and eosin (h&e) stained tissue images and quantifying intratumor cellular spatial heterogeneity in …

S. Chakra Chennubhotla Information

University

Position

Associate Professor of Computational and Systems Biology

Citations(all)

3790

Citations(since 2020)

1580

Cited By

2948

hIndex(all)

30

hIndex(since 2020)

22

i10Index(all)

50

i10Index(since 2020)

37

Email

University Profile Page

Google Scholar

S. Chakra Chennubhotla Skills & Research Interests

computational biology

computer vision

machine learning

Top articles of S. Chakra Chennubhotla

Title

Journal

Author(s)

Publication Date

Predicting cancer recurrence from spatial multi-parameter cellular and subcellular imaging data

2024/2/22

Segmentation-free analysis of multiplexed images with unbiased spatial analytics and explainable AI for predicting disease outcomes

Cancer Research

Filippo Pullara

Brian Falkenstein

Bruce Campbell

Samantha Panakkal

Akif Burak Tosun

...

2023/4/4

Scalable and high precision context-guided segmentation of histological structures including ducts/glands and lumen, cluster of ducts/glands, and individual nuclei in whole …

2023/3/30

Abstract P6-04-12: Differential diagnoses of breast biopsies by spatial parametric modeling of histological structures and explainable AI

Cancer Research

Akif Burak Tosun

S Chakra Chennubhotla

2023/3/1

# COVIDisAirborne: AI-enabled multiscale computational microscopy of delta SARS-CoV-2 in a respiratory aerosol

The international journal of high performance computing applications

Abigail Dommer

Lorenzo Casalino

Fiona Kearns

Mia Rosenfeld

Nicholas Wauer

...

2023/1

Explainable AI (xAI) platform for computational pathology

2023/12/12

Parametric Modeling and Inference of Diagnostically Relevant Histological Patterns in Digitized Tissue Images

2023/8/17

Systems and methods for finding regions of interest in hematoxylin and eosin (h&e) stained tissue images and quantifying intratumor cellular spatial heterogeneity in …

2022/10/13

System and method for characterizing cellular phenotypic diversity from multi-parameter cellular, and sub-cellular imaging data

2022/7/7

Systems and methods for finding regions of in interest in hematoxylin and eosin (HandE) stained tissue images and quantifying intratumor cellular spatial heterogeneity in …

2022/7/5

TumorMapr™ analytical software platform: Unbiased spatial analytics and explainable AI (xAI) platform for generating data, extracting information, and creating knowledge from …

Cancer Research

Samantha Panakkal

Brian Falkenstein

Akif Burak Tosun

Bruce Campbell

Michael Becich

...

2022/6/15

Computational systems pathology spatial analysis platform for in situ or in vitro multi-parameter cellular and subcellular imaging data

2022/2/10

Intelligent resolution: Integrating Cryo-EM with AI-driven multi-resolution simulations to observe the severe acute respiratory syndrome coronavirus-2 replication-transcription …

The International Journal of High Performance Computing Applications

Anda Trifan

Defne Gorgun

Michael Salim

Zongyi Li

Alexander Brace

...

2022/11

Spatially co-registered genomic and imaging (scorgi) data elements for fingerprinting microdomains

2021/12/9

Classification of Diffuse Subcellular Morphologies.

Neelima Pulagam

Marcus Hill

Mojtaba Sedigh Fazli

Rachel Mattson

Meekail Zain

...

2021

High-throughput virtual screening and validation of a SARS-CoV-2 main protease noncovalent inhibitor

Journal of chemical information and modeling

Austin Clyde

Stephanie Galanie

Daniel W Kneller

Heng Ma

Yadu Babuji

...

2021/11/18

In situ functional cell phenotyping reveals microdomain networks in colorectal cancer recurrence

Cell reports methods

Samantha A Furman

Andrew M Stern

Shikhar Uttam

D Lansing Taylor

Filippo Pullara

...

2021/9/27

1 Unsupervised cellular phenotypic hierarchy enables spatial intratumor heterogeneity characterization, recurrence-associated microdomains discovery, and harnesses network …

Cancer Research

Samantha Furman

Andrew Stern

Shikhar Uttam

Taylor D Lansing

Pullara Filippo

...

2021/7/1

Artificial intelligence techniques for integrative structural biology of intrinsically disordered proteins

Arvind Ramanathan

Heng Ma

Akash Parvatikar

S Chakra Chennubhotla

2021/2/1

Prototypical models for classifying high-risk atypical breast lesions

Akash Parvatikar

Om Choudhary

Arvind Ramanathan

Rebekah Jenkins

Olga Navolotskaia

...

2021

See List of Professors in S. Chakra Chennubhotla University(University of Pittsburgh)