Rolf Backofen
Albert-Ludwigs-Universität Freiburg
H-index: 65
Europe-Germany
Top articles of Rolf Backofen
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
RNAformer: A Simple Yet Effective Deep Learning Model for RNA Secondary Structure Prediction | bioRxiv | Joerg KH Franke Frederic Runge Ryan Koeksal Rolf Backofen Frank Hutter | 2024 |
The role of the 5’sensing function of ribonuclease E in cyanobacteria | RNA biology | Ute A Hoffmann Elisabeth Lichtenberg Said N Rogh Raphael Bilger Viktoria Reimann | 2024/12/31 |
Heterogenous nuclear ribonucleoprotein D-like controls endothelial cell functions | Biological Chemistry | Sandra Fischer Chiara Lichtenthaeler Anastasiya Stepanenko Florian Heyl Daniel Maticzka | 2024/4/25 |
Interrogating two extensively self-targeting Type I CRISPR-Cas systems in Xanthomonas albilineans reveals distinct anti-CRISPR proteins that block DNA … | Nucleic Acids Research | Franziska Wimmer Frank Englert Katharina G Wandera Omer S Alkhnbashi Scott P Collins | 2024/1/25 |
Improved discovery of RNA-binding protein binding sites in eCLIP data using DEWSeq | Nucleic Acids Research | Thomas Schwarzl Sudeep Sahadevan Benjamin Lang Milad Miladi Rolf Backofen | 2024/1/11 |
SpacerPlacer: Ancestral reconstruction of CRISPR arrays reveals the evolutionary dynamics of spacer deletions | bioRxiv | Axel Fehrenbach Alexander Mitrofanov Omer S Alkhnbashi Rolf Backofen Franz Baumdicker | 2024 |
RNA interaction format: a general data format for RNA interactions | Bioinformatics | Richard A Schäfer Dominik Rabsch Guillaume E Scholz Peter F Stadler Wolfgang R Hess | 2023/11/1 |
Revealing the small proteome of Haloferax volcanii by combining ribosome profiling and small-protein optimized mass spectrometry | Microlife | Lydia Hadjeras Jürgen Bartel Lisa-Katharina Maier Sandra Maaß Verena Vogel | 2023/1/4 |
The challenges of research data management in cardiovascular science: a DGK and DZHK position paper—executive summary | Sabine Steffens Katrin Schröder Martina Krüger Christoph Maack Katrin Streckfuss-Bömeke | 2023/10/17 | |
Partial RNA Design | bioRxiv | Frederic Runge Jörg KH Franke Daniel Fertmann Rolf Backofen Frank Hutter | 2023/12/30 |
Unraveling the small proteome of the plant symbiont Sinorhizobium meliloti by ribosome profiling and proteogenomics | Microlife | Lydia Hadjeras Benjamin Heiniger Sandra Maaß Robina Scheuer Rick Gelhausen | 2023 |
Embedding the de. NBI Cloud in the National Research Data Infrastructure Activities | Proceedings of the Conference on Research Data Infrastructure | Nils Hoffmann Irena Maus Sebastian Beier Peter Belmann Jan Krüger | 2023/9/7 |
Ribosome profiling reveals the fine-tuned response of Escherichia coli to mild and severe acid stress | Msystems | Kilian Schumacher Rick Gelhausen Willow Kion-Crosby Lars Barquist Rolf Backofen | 2023/12/21 |
An accessible infrastructure for artificial intelligence using a Docker-based JupyterLab in Galaxy | GigaScience | Anup Kumar Gianmauro Cuccuru Björn Grüning Rolf Backofen | 2023 |
Meta-Analysis of Mechano-Sensitive Ion Channels in Human Hearts: Chamber-and Disease-Preferential mRNA Expression | International Journal of Molecular Sciences | Elisa Darkow Dilmurat Yusuf Sridharan Rajamani Rolf Backofen Peter Kohl | 2023/6/30 |
Characterization of the zinc finger μ-protein HVO_0758 from Haloferax volcanii: biological roles, zinc binding, and NMR solution structure | Frontiers in Microbiology | Deniz Üresin Dennis J Pyper Andreas Borst Lydia Hadjeras Rick Gelhausen | 2023/11/29 |
Tyrosine kinase inhibitors can activate the NLRP3 inflammasome in myeloid cells through lysosomal damage and cell lysis | Science Signaling | Emilia Neuwirt Giovanni Magnani Tamara Ćiković Svenja Wöhrle Larissa Fischer | 2023/1/17 |
Transformer-based tool recommendation system in Galaxy | BMC bioinformatics | Anup Kumar Björn Grüning Rolf Backofen | 2023/11/27 |
Distinct SARS-CoV-2 RNA fragments activate Toll-like receptors 7 and 8 and induce cytokine release from human macrophages and microglia | Frontiers in immunology | Thomas Wallach Martin Raden Lukas Hinkelmann Mariam Brehm Dominik Rabsch | 2023/1/13 |
Peakhood: individual site context extraction for CLIP-seq peak regions | Bioinformatics | Michael Uhl Dominik Rabsch Florian Eggenhofer Rolf Backofen | 2022/2/15 |
Co-Authors
