Rhiju Das
Stanford University
H-index: 67
North America-United States
Top articles of Rhiju Das
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
Tertiary folds of the SL5 RNA from the 5′ proximal region of SARS-CoV-2 and related coronaviruses | Proceedings of the National Academy of Sciences | Rachael C Kretsch Lily Xu Ivan N Zheludev Xueting Zhou Rui Huang | 2024/3/5 |
Minimization of the E. coli ribosome, aided and optimized by community science | Nucleic Acids Research | Tiyaporn Tangpradabkul Michael Palo Jill Townley Kenneth B Hsu Eterna Participants | 2024/2/9 |
Compact RNA sensors for increasingly complex functions of multiple inputs | bioRxiv | Christian Choe Johan OL Andreasson Feriel Melaine Wipapat Kladwang Michelle J Wu | 2024/1/4 |
Ribonanza: deep learning of RNA structure through dual crowdsourcing | bioRxiv | Shujun He Rui Huang Jill Townley Rachael C Kretsch Thomas G Karagianes | 2024 |
Systems and Methods to Enhance RNA Stability and Translation and Uses Thereof | 2022/1/13 | ||
CASP15 cryo‐EM protein and RNA targets: Refinement and analysis using experimental maps | Proteins: Structure, Function, and Bioinformatics | Thomas Mulvaney Rachael C Kretsch Luc Elliott Joseph G Beton Andriy Kryshtafovych | 2023/12 |
Community science designed ribosomes with beneficial phenotypes | Nature communications | Antje Krüger Andrew M Watkins Roger Wellington-Oguri Jonathan Romano Camila Kofman | 2023/2/21 |
RNA target highlights in CASP15: Evaluation of predicted models by structure providers | Proteins: Structure, Function, and Bioinformatics | Rachael C Kretsch Ebbe S Andersen Janusz M Bujnicki Wah Chiu Rhiju Das | 2023/12 |
Modeling of RNA-only structures | Biophysical Journal | Rhiju Das | 2023/2/10 |
New prediction categories in CASP15 | Proteins: Structure, Function, and Bioinformatics | Andriy Kryshtafovych Maciej Antczak Marta Szachniuk Tomasz Zok Rachael C Kretsch | 2023/12 |
RNA 3D modeling with FARFAR2, online | Andrew M Watkins Rhiju Das | 2023/1/28 | |
Assessment of three‐dimensional RNA structure prediction in CASP15 | Proteins: Structure, Function, and Bioinformatics | Rhiju Das Rachael C Kretsch Adam J Simpkin Thomas Mulvaney Phillip Pham | 2023/12 |
Tertiary folds of the SL5 RNA from the 5'proximal region of SARS-CoV-2 and related coronaviruses (preprint) | Rachael C Kretsch Lily Xu Ivan N Zheludev Xueting Zhou Rui Huang | 2023 | |
Cover Image, Volume 91, Issue 12 | Proteins: Structure, Function, and Bioinformatics | Rhiju Das Rachael C Kretsch Adam J Simpkin Thomas Mulvaney Phillip Pham | 2023/12 |
CASP15 cryoEM protein and RNA targets: refinement and analysis using experimental maps | Authorea Preprints | Maya Topf Thomas Mulvaney Rachael C Kretsch Luc Elliott Joe Beton | 2023/6/22 |
Deep learning models for predicting RNA degradation via dual crowdsourcing | Nature Machine Intelligence | Hannah K Wayment-Steele Wipapat Kladwang Andrew M Watkins Do Soon Kim Bojan Tunguz | 2022/12 |
Correction to “the rosetta all-atom energy function for macromolecular modeling and design” | Journal of chemical theory and computation | Rebecca F Alford Andrew Leaver-Fay Jeliazko R Jeliazkov Matthew J O’Meara Frank P DiMaio | 2022/6/6 |
Programmable antivirals targeting critical conserved viral RNA secondary structures from influenza A virus and SARS-CoV-2 | Nature medicine | Rachel J Hagey Menashe Elazar Edward A Pham Siqi Tian Lily Ben-Avi | 2022/9 |
Auto-DRRAFTER: automated RNA modeling based on cryo-EM density | Haiyun Ma Phillip Pham Bingnan Luo Ramya Rangan Kalli Kappel | 2022/10/14 | |
Three-dimensional structure-guided evolution of a ribosome with tethered subunits | Nature chemical biology | Do Soon Kim Andrew Watkins Erik Bidstrup Joongoo Lee Ved Topkar | 2022/9 |
Co-Authors
