Qing Nie

Qing Nie

University of California, Irvine

H-index: 53

North America-United States

About Qing Nie

Qing Nie, With an exceptional h-index of 53 and a recent h-index of 39 (since 2020), a distinguished researcher at University of California, Irvine, specializes in the field of Computational Biology, Systems Biology.

His recent articles reflect a diverse array of research interests and contributions to the field:

Emx2 underlies the development and evolution of marsupial gliding membranes

Tipping points in epithelial-mesenchymal lineages from single-cell transcriptomics data

Spatial–temporal order–disorder transition in angiogenic NOTCH signaling controls cell fate specification

CellChat for systematic analysis of cell-cell communication from single-cell and spatially resolved transcriptomics

A multifunctional Wnt regulator underlies the evolution of rodent stripe patterns

LB1672 Senescent melanocytes in nevus skin stimulate hair growth

Research briefing

1506 Multimodal transcriptomics highlight fibroblast heterogeneity and pathological signaling networks in keloid

Qing Nie Information

University

Position

___

Citations(all)

12817

Citations(since 2020)

8497

Cited By

6400

hIndex(all)

53

hIndex(since 2020)

39

i10Index(all)

169

i10Index(since 2020)

130

Email

University Profile Page

University of California, Irvine

Google Scholar

View Google Scholar Profile

Qing Nie Skills & Research Interests

Computational Biology

Systems Biology

Top articles of Qing Nie

Title

Journal

Author(s)

Publication Date

Emx2 underlies the development and evolution of marsupial gliding membranes

Nature

Jorge A Moreno

Olga Dudchenko

Charles Y Feigin

Sarah A Mereby

Zhuoxin Chen

...

2024/4/24

Tipping points in epithelial-mesenchymal lineages from single-cell transcriptomics data

Biophysical Journal

Manuel Barcenas

Federico Bocci

Qing Nie

2024/3/18

Spatial–temporal order–disorder transition in angiogenic NOTCH signaling controls cell fate specification

Elife

Tae-Yun Kang

Federico Bocci

Qing Nie

José N Onuchic

Andre Levchenko

2024/2/20

CellChat for systematic analysis of cell-cell communication from single-cell and spatially resolved transcriptomics

BioRxiv

Suoqin Jin

Maksim V Plikus

Qing Nie

2023

A multifunctional Wnt regulator underlies the evolution of rodent stripe patterns

Nature ecology & evolution

Matthew R Johnson

Sha Li

Christian F Guerrero-Juarez

Pearson Miller

Benjamin J Brack

...

2023/12

LB1672 Senescent melanocytes in nevus skin stimulate hair growth

Journal of Investigative Dermatology

X Wang

R Ramos

N Shettigar

Q Nie

M Plikus

2023/9/1

Research briefing

Victor L Ríos

Pavan Ramdya

2022/5/11

1506 Multimodal transcriptomics highlight fibroblast heterogeneity and pathological signaling networks in keloid

Journal of Investigative Dermatology

Y Liu

CF Guerrero-Juarez

Q Nie

J Li

M Plikus

2023/5/1

exFINDER: identify external communication signals using single-cell transcriptomics data

Nucleic acids research

Changhan He

Peijie Zhou

Qing Nie

2023/6/9

NEURALGENE: INFERRING GENE REGULATION AND CELL-FATE DYNAMICS FROM NEURAL ODES

Journal of Machine Learning for Modeling and Computing

Yutong Sha

Yuchi Qiu

Qing Nie

2023

NeST: nested hierarchical structure identification in spatial transcriptomic data

Nature Communications

Benjamin L Walker

Qing Nie

2023/10/17

Theoretical and computational tools to model multistable gene regulatory networks

Federico Bocci

Dongya Jia

Qing Nie

Mohit Kumar Jolly

Jose Onuchic

2023/8/2

Screening cell–cell communication in spatial transcriptomics via collective optimal transport

Nature methods

Zixuan Cang

Yanxiang Zhao

Axel A Almet

Adam Stabell

Raul Ramos

...

2023/2

Preneoplastic stromal cells promote BRCA1-mediated breast tumorigenesis

Nature Genetics

Kevin Nee

Dennis Ma

Quy H Nguyen

Maren Pein

Nicholas Pervolarakis

...

2023/4

Single-cell transcriptomics of human-skin-equivalent organoids

Cell reports

Adam R Stabell

Grace E Lee

Yunlong Jia

Kirsten N Wong

Shuxiong Wang

...

2023/5/30

A mathematical method and software for spatially mapping intercellular Communication

Nature methods

Zixuan Cang

2023/1

A roadmap for a consensus human skin cell atlas and single-cell data standardization

Axel A Almet

Hao Yuan

Karl Annusver

Raul Ramos

Yingzi Liu

...

2023/9/1

The promising application of cell-cell interaction analysis in cancer from single-cell and spatial transcriptomics

Xinyi Wang

Axel A Almet

Qing Nie

2023/7/15

Differential cell composition and split epidermal differentiation in human palm, sole, and hip skin

Cell reports

Julie Wiedemann

Allison C Billi

Federico Bocci

Ghaidaa Kashgari

Enze Xing

...

2023/1/31

Interruption of the Intratumor CD8: Treg Crosstalk Improves the Efficacy of PD-1 Immunotherapy

bioRxiv

Shannon N Geels

Alexander Moshensky

Rachel S Sousa

Benjamin L Walker

Rima Singh

...

2023/5/18

See List of Professors in Qing Nie University(University of California, Irvine)