Pufeng Du
Tianjin University
H-index: 23
Asia-China
Top articles of Pufeng Du
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
Vislocas: Vision transformers for identifying protein subcellular mis-localization signatures of different cancer subtypes from immunohistochemistry images | Computers in Biology and Medicine | Jing-Wen Wen Han-Lin Zhang Pu-Feng Du | 2024/4/9 |
SilenceREIN: seeking silencers on anchors of chromatin loops by deep graph neural networks | Briefings in Bioinformatics | Jian-Hua Pan Pu-Feng Du | 2024/1/1 |
iEssLnc: quantitative estimation of lncRNA gene essentialities with meta-path-guided random walks on the lncRNA-protein interaction network | Briefings in Bioinformatics | Ying-Ying Zhang De-Min Liang Pu-Feng Du | 2023/5 |
PLA-GNN: Computational inference of protein subcellular location alterations under drug treatments with deep graph neural networks | Computers in Biology and Medicine | Ren-Hua Wang Tao Luo Han-Lin Zhang Pu-Feng Du | 2023/5/1 |
Essential non-coding genes: a new playground of bioinformatics | Current Bioinformatics | Ying-Ying Zhang Pu-Feng Du | 2023/2/1 |
dbMisLoc: a manually curated database of conditional protein Mis-localization events | Interdisciplinary Sciences: Computational Life Sciences | Ren-Hua Wang Tao Luo Yu-Peng Guo Zi-Xin Yang He-Yi Zhang | 2023/9 |
XGEM: predicting essential miRNAs by the ensembles of various sequence-based classifiers with XGBoost algorithm | Frontiers in Genetics | Hui Min Xiao-Hong Xin Chu-Qiao Gao Likun Wang Pu-Feng Du | 2022/3/28 |
SGII: systematic identification of essential lncRNAs in mouse and human genome with lncRNA-protein-protein heterogeneous interaction network | Frontiers in Genetics | Xiao-Hong Xin Ying-Ying Zhang Chu-Qiao Gao Hui Min Likun Wang | 2022/3/21 |
DDA-SKF: predicting drug–disease associations using similarity kernel fusion | Chu-Qiao Gao Yuan-Ke Zhou Xiao-Hong Xin Hui Min Pu-Feng Du | 2022/1/13 | |
dbEssLnc: A manually curated database of human and mouse essential lncRNA genes | Computational and Structural Biotechnology Journal | Ying-Ying Zhang Wen-Ya Zhang Xiao-Hong Xin Pu-Feng Du | 2022/1/1 |
Recent advances in predicting protein-lncRNA interactions using machine learning methods | Han Yu Zi-Ang Shen Yuan-Ke Zhou Pu-Feng Du | 2022/6/1 | |
INPUT: An intelligent network pharmacology platform unique for traditional Chinese medicine | Computational and Structural Biotechnology Journal | Xianhai Li Qiang Tang Fanbo Meng Pufeng Du Wei Chen | 2022/1/1 |
i5hmCVec: Identifying 5-Hydroxymethylcytosine Sites of Drosophila RNA Using Sequence Feature Embeddings | Frontiers in Genetics | Hang-Yu Liu Pu-Feng Du | 2022/5/3 |
DeepSE: Detecting super-enhancers among typical enhancers using only sequence feature embeddings | Genomics | Qiao-Ying Ji Xiu-Jun Gong Hao-Min Li Pu-Feng Du | 2021/11/1 |
NPI-RGCNAE: fast predicting ncRNA-protein interactions using the relational graph convolutional network auto-encoder | IEEE Journal of Biomedical and Health Informatics | Han Yu Zi-Ang Shen Pu-Feng Du | 2021/10/26 |
NPI-GNN: predicting ncRNA–protein interactions with deep graph neural networks | Briefings in bioinformatics | Zi-Ang Shen Tao Luo Yuan-Ke Zhou Han Yu Pu-Feng Du | 2021/9 |
KNIndex: a comprehensive database of physicochemical properties for k-tuple nucleotides | Briefings in Bioinformatics | Wen-Ya Zhang Junhai Xu Jun Wang Yuan-Ke Zhou Wei Chen | 2021/7 |
Predicting protein subchloroplast locations: the 10th anniversary | Jian Sun Pu-Feng Du | 2021/4 | |
CPPred-FL: a sequence-based predictor for large-scale identification of cell-penetrating peptides by feature representation learning | Xiaoli Qiang Chen Zhou Xiucai Ye Pu-feng Du Ran Su | 2020/1 | |
DPPN-SVM: computational identification of mis-localized proteins in cancers by integrating differential gene expressions with dynamic protein-protein interaction networks | Frontiers in Genetics | Guang-Ping Li Pu-Feng Du Zi-Ang Shen Hang-Yu Liu Tao Luo | 2020/10/23 |
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