Pranam Chatterjee
Massachusetts Institute of Technology
H-index: 14
North America-United States
Top articles of Pranam Chatterjee
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
PTM-Mamba: A PTM-Aware Protein Language Model with Bidirectional Gated Mamba Blocks | bioRxiv | Zhangzhi Peng Benjamin Schussheim Pranam Chatterjee | 2024 |
AMP-diffusion: Integrating latent diffusion with protein language models for antimicrobial peptide generation | bioRxiv | Tianlai Chen Pranay Vure Rishab Pulugurta Pranam Chatterjee | 2024 |
Platform and method for determining critical transcription factors (tf) for tf-based human induced pluripotent stem cell (hipsc) differentiation | 2023/5/11 | ||
How can the protein design community best support biologists who want to harness AI tools for protein structure prediction and design? | Cell Systems | Birte Höcker Peilong Lu Anum Glasgow Debora S Marks Pranam Chatterjee | 2023/8/16 |
Beyond Small Molecule-Based Protein Targeting in the Era of Deep Learning | Pranam Chatterjee | 2023/9/9 | |
Abstract C118: Design of programmable peptide-guided oncoprotein degraders via generative language models | Molecular Cancer Therapeutics | Suhaas Bhat Garyk Brixi Kalyan Palepu Lauren Hong Vivian Yudistyra | 2023/12/1 |
Streptococcus Canis Cas9 as a Genome Engineering Platform with Novel PAM Specificity | 2019/7/18 | ||
Design of peptide-guided protein degraders with Structure-agnostic language models | Garyk Brixi Tianzheng Ye Kalyan Palepu Lauren Hong Vivian Yudistyra | 2023/4/7 | |
Applications of engineered Streptococcus canis Cas9 variants on single-base PAM targets | 2020/10/22 | ||
Human-induced pluripotent stem cell-derived ovarian support cell co-culture improves oocyte maturation in vitro after abbreviated gonadotropin stimulation | Human Reproduction | Sabrina Piechota Maria Marchante Alexa Giovannini Bruna Paulsen Kathryn S Potts | 2023/12/1 |
De Novo Generation and Prioritization of Target-Binding Peptide Motifs from Sequence Alone | bioRxiv | Suhaas Bhat Kalyan Palepu Vivian Yudistyra Lauren Hong Venkata Srikar Kavirayuni | 2023 |
Improved rescue of immature oocytes obtained from conventional gonadotropin stimulation cycles via human induced pluripotent stem cell-derived ovarian support cell co-culture | bioRxiv | Alexa Giovannini Sabrina Piechota Maria Marchante Kathryn S Potts Graham Rockwell | 2023/3/29 |
Applications of Recombined ScCas9 Enzymes for PAM-free DNA Modification | 2023/6/22 | ||
SaLT&PepPr is an interface-predicting language model for designing peptide-guided protein degraders | Communications Biology | Garyk Brixi Tianzheng Ye Lauren Hong Tian Wang Connor Monticello | 2023/10/24 |
Correction: directed differentiation of human iPSCs to functional ovarian granulosa-like cells via transcription factor overexpression | Elife | Merrick D Pierson Smela Christian C Kramme Patrick RJ Fortuna Jessica L Adams Alina Rui Su | 2023/3/22 |
Peptide based probes for the detection of sars-cov-2 | 2023/6/22 | ||
Generative design of therapeutics that bind and modulate protein states | Tianlai Chen Lauren Hong Vivian Yudistyra Sophia Vincoff Pranam Chatterjee | 2023/8/21 | |
PepMLM: Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling | ArXiv | Tianlai Chen Sarah Pertsemlidis Rio Watson Venkata Srikar Kavirayuni Ashley Hsu | 2023/10/5 |
Human Germ Cell Specification via Combinatorial Expression of Prioritized Transcription Factors | Christian Kramme Merrick Smela Bennett Wolf Patrick Fortuna Garyk Brixi | 2023/3/9 | |
Genome-wide profiling of prime editor off-target sites in vitro and in vivo using PE-tag | Nature Methods | Shun-Qing Liang Pengpeng Liu Karthikeyan Ponnienselvan Sneha Suresh Zexiang Chen | 2023/6 |
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