Pavel Baranov, "Pasha"

Pavel Baranov, "Pasha"

University College Cork

H-index: 46

Europe-Ireland

About Pavel Baranov, "Pasha"

Pavel Baranov, "Pasha", With an exceptional h-index of 46 and a recent h-index of 30 (since 2020), a distinguished researcher at University College Cork, specializes in the field of mRNA translation, Genetic Code, Ribosome profiling.

His recent articles reflect a diverse array of research interests and contributions to the field:

Impact of eIF2α phosphorylation on the translational landscape of mouse embryonic stem cells

Guidelines for minimal reporting requirements, design and interpretation of experiments involving the use of eukaryotic dual gene expression reporters (MINDR)

Addendum: Thousands of human non-AUG extended proteoforms lack evidence of evolutionary selection among mammals

Ribosome profiling reveals downregulation of UMP biosynthesis as the major early response to phage infection

RiboGalaxy: A Galaxy-based Web Platform for Ribosome Profiling Data Processing–2023 Update

Nontriplet feature of genetic code in Euplotes ciliates is a result of neutral evolution

No stopping with a short-stem transfer RNA

Monitoring translation in all reading frames downstream of weak stop codons provides mechanistic insights into the impact of nucleotide and cellular contexts

Pavel Baranov, "Pasha" Information

University

Position

Professor of Biomolecular Informatics Ireland

Citations(all)

6615

Citations(since 2020)

3300

Cited By

4613

hIndex(all)

46

hIndex(since 2020)

30

i10Index(all)

83

i10Index(since 2020)

66

Email

University Profile Page

University College Cork

Google Scholar

View Google Scholar Profile

Pavel Baranov, "Pasha" Skills & Research Interests

mRNA translation

Genetic Code

Ribosome profiling

Top articles of Pavel Baranov, "Pasha"

Title

Journal

Author(s)

Publication Date

Impact of eIF2α phosphorylation on the translational landscape of mouse embryonic stem cells

Cell Reports

Mehdi Amiri

Stephen J Kiniry

Anthony P Possemato

Niaz Mahmood

Tayebeh Basiri

...

2024/1/23

Guidelines for minimal reporting requirements, design and interpretation of experiments involving the use of eukaryotic dual gene expression reporters (MINDR)

Gary Loughran

Dmitry E Andreev

Ilya M Terenin

Olivier Namy

Martin Mikl

...

2024/1/15

Addendum: Thousands of human non-AUG extended proteoforms lack evidence of evolutionary selection among mammals

nature communications

Alla D Fedorova

Stephen J Kiniry

Dmitry E Andreev

Jonathan M Mudge

Pavel V Baranov

2024/1/3

Ribosome profiling reveals downregulation of UMP biosynthesis as the major early response to phage infection

Microbiology Spectrum

Patrick BF O’Connor

Jennifer Mahony

Eoghan Casey

Pavel V Baranov

Douwe van Sinderen

...

2024/4/2

RiboGalaxy: A Galaxy-based Web Platform for Ribosome Profiling Data Processing–2023 Update

Journal of Molecular Biology

Alla D Fedorova

Jack AS Tierney

Audrey M Michel

Pavel V Baranov

2023/7/15

Nontriplet feature of genetic code in Euplotes ciliates is a result of neutral evolution

Proceedings of the National Academy of Sciences

Sofya A Gaydukova

Mikhail A Moldovan

Adriana Vallesi

Stephen M Heaphy

John F Atkins

...

2023/5/30

No stopping with a short-stem transfer RNA

Pavel V Baranov

John F Atkins

2023/1/26

Monitoring translation in all reading frames downstream of weak stop codons provides mechanistic insights into the impact of nucleotide and cellular contexts

Nucleic Acids Research

Gary Loughran

Xiang Li

Sinead O’Loughlin

John F Atkins

Pavel V Baranov

2023/1/11

Streptomyces rare codon UUA: from features associated with 2 adpA related locations to candidate phage regulatory translational bypassing

RNA biology

Ivan V Antonov

Sinéad O’Loughlin

Alessandro N Gorohovski

Patrick BF O’Connor

Pavel V Baranov

...

2023/12/31

Ribosome Decision Graphs for the Representation of Eukaryotic RNA Translation Complexity

bioRxiv

Jack AS Tierney

Michał Świrski

Håkon Tjeldnes

Jonathan M Mudge

Joanna Kufel

...

2023/11/12

Evaluating data integrity in ribosome footprinting datasets through modelled polysome profiles

Nucleic Acids Research

Fabio Hedayioglu

Emma J Mead

Patrick BF O'Connor

Matas Skiotys

Owen J Sansom

...

2022/10/28

Identification of a novel gene required for competitive growth at high temperature in the thermotolerant yeast Kluyveromyces marxianus

Microbiology

Noemi Montini

Tyler W Doughty

Iván Domenzain

Darren A Fenton

Pavel V Baranov

...

2022/3/25

Mitochondrial complex IV defects induce metabolic and signaling perturbations that expose potential vulnerabilities in HCT116 cells

FEBS Open bio

Oro Uchenunu

Alexander V Zhdanov

Phillipe Hutton

Predrag Jovanovic

Ye Wang

...

2022/5

Evolution of naturally arising SARS-CoV-2 defective interfering particles

Communications Biology

Samer Girgis

Zaikun Xu

Spyros Oikonomopoulos

Alla D Fedorova

Egor P Tchesnokov

...

2022/10/27

Immune cells alter genetic decoding in cancer

Pavel V Baranov

John F Atkins

2022/3/24

Regulated use of alternative Transcription Start Sites controls the production of cytosolic or mitochondrial forms of branched-chain aminotransferase in Kluyveromyces marxianus

bioRxiv

Angela Coral-Medina

Darren A Fenton

Javier Varela

Carole Camarasa

Pavel V Baranov

...

2022/4/28

Lack of evidence for ribosomal frameshifting in ATP7B mRNA decoding

Molecular cell

Gary Loughran

Alla D Fedorova

Yousuf A Khan

John F Atkins

Pavel V Baranov

2022/10/6

The evolution and role of the periplasmic asparaginase Asp3 in yeast

FEMS Yeast Research

Angela Coral-Medina

Darren A Fenton

Javier Varela

Pavel V Baranov

Carole Camarasa

...

2022

Evaluating ribosomal frameshifting in CCR5 mRNA decoding

Nature

Yousuf A Khan

Gary Loughran

Anna-Lena Steckelberg

Katherine Brown

Stephen J Kiniry

...

2022/4/21

Ghrelin rapidly elevates protein synthesis in vitro by employing the rpS6K-eEF2K-eEF2 signalling axis

Cellular and Molecular Life Sciences

Alexander V Zhdanov

Anna V Golubeva

Martina M Yordanova

Dmitry E Andreev

Ana Paula Ventura-Silva

...

2022/8

See List of Professors in Pavel Baranov, "Pasha" University(University College Cork)

Co-Authors

H-index: 125
Vadim Gladyshev

Vadim Gladyshev

Harvard University

H-index: 62
Papkovsky

Papkovsky

University College Cork

H-index: 59
Andrew E Firth

Andrew E Firth

University of Cambridge

H-index: 56
Mark Borodovsky

Mark Borodovsky

Georgia Institute of Technology

H-index: 35
Sergey Dmitriev

Sergey Dmitriev

Moscow State University

H-index: 35
Alexander V. Zhdanov

Alexander V. Zhdanov

University College Cork

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