Paola Bonizzoni
Università degli Studi di Milano-Bicocca
H-index: 25
Europe-Italy
Top articles of Paola Bonizzoni
From the Lyndon factorization to the Canonical Inverse Lyndon factorization: back and forth
arXiv preprint arXiv:2404.17969
2024/4/27
Data Structures for SMEM-Finding in the PBWT
2023/9/20
Paola Bonizzoni
H-Index: 15
Christina Boucher
H-Index: 20
Travis Gagie
H-Index: 22
Massimiliano Rossi
H-Index: 3
μ-PBWT: a lightweight r-indexing of the PBWT for storing and querying UK Biobank data
Bioinformatics
2023/9/1
Multiallelic Maximal Perfect Haplotype Blocks with Wildcards via PBWT
2023/6/29
SVDSS: structural variation discovery in hard-to-call genomic regions using sample-specific strings from accurate long reads
Nature Methods
2023/4
μ-PBWT: Enabling the Storage and Use of UK Biobank Data on a Commodity Laptop
bioRxiv
2023/2/16
Massimiliano Rossi
H-Index: 3
Simone Rubinacci
H-Index: 4
Christina Boucher
H-Index: 20
Paola Bonizzoni
H-Index: 15
Identification of Chimeric RNAs: a novel machine learning perspective
2023
Differential quantification of alternative splicing events on spliced pangenome graphs
bioRxiv
2023
Paola Bonizzoni
H-Index: 15
ESGq: Alternative Splicing events quantification across conditions based on Event Splicing Graphs
bioRxiv
2023
Paola Bonizzoni
H-Index: 15
Accurate and fast clade assignment via deep learning and frequency chaos game representation
GigaScience
2023
Paola Bonizzoni
H-Index: 15
RecGraph: adding recombinations to sequence-to-graph alignments
bioRxiv
2022
Paola Bonizzoni
H-Index: 15
Yuri Pirola
H-Index: 10
Compressed data structures for population-scale Positional Burrows–Wheeler Transforms
bioRxiv
2022/9/19
Paola Bonizzoni
H-Index: 15
Christina Boucher
H-Index: 20
Travis Gagie
H-Index: 22
Massimiliano Rossi
H-Index: 3
Numeric Lyndon-based feature embedding of sequencing reads for machine learning approaches
Information Sciences
2022/8/1
Kfinger: capturing overlaps between long reads by using Lyndon fingerprints
2022/6/8
Can Formal Languages help Pangenomics to represent and analyze multiple genomes?
2022/5/6
Paola Bonizzoni
H-Index: 15
Clelia De Felice
H-Index: 9
Yuri Pirola
H-Index: 10
Raffaella Rizzi
H-Index: 10
Rosalba Zizza
H-Index: 7
Computational graph pangenomics: a tutorial on data structures and their applications
2022/3
Paola Bonizzoni
H-Index: 15
Christina Boucher
H-Index: 20
Yuri Pirola
H-Index: 10
Raffaella Rizzi
H-Index: 10
Improved structural variant discovery in hard-to-call regions using sample-specific string detection from accurate long reads
bioRxiv
2022/2/14
Finding maximal exact matches using the r-index
Journal of Computational Biology
2022/2/1
MALVIRUS: an integrated application for viral variant analysis
BMC bioinformatics
2021/11
Can we replace reads by numeric signatures? Lyndon fingerprints as representations of sequencing reads for machine learning
2021/5/31
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