Ole Winther

Ole Winther

Københavns Universitet

H-index: 65

Europe-Denmark

About Ole Winther

Ole Winther, With an exceptional h-index of 65 and a recent h-index of 52 (since 2020), a distinguished researcher at Københavns Universitet, specializes in the field of machine learning, bioinformatics, deep learning, artificial intelligence.

His recent articles reflect a diverse array of research interests and contributions to the field:

DeepLocRNA: an interpretable deep learning model for predicting RNA subcellular localisation with domain-specific transfer-learning

Can large language models reason about medical questions?

Predicting the subcellular location of prokaryotic proteins with DeepLocPro

CURATOR: Building Robust Machine Learning Potentials for Atomistic Simulations Autonomously with Batch Active Learning

Implicit Transfer Operator Learning: Multiple Time-Resolution Models for Molecular Dynamics

Aligning Optimization Trajectories with Diffusion Models for Constrained Design Generation

DiscoTope-3.0: improved B-cell epitope prediction using inverse folding latent representations

DeepLoc 2.1: multi-label membrane protein type prediction using protein language models

Ole Winther Information

University

Position

Biology Genomic Medicine Rigshospitalet and Technical University of Denmark

Citations(all)

22614

Citations(since 2020)

16315

Cited By

11849

hIndex(all)

65

hIndex(since 2020)

52

i10Index(all)

158

i10Index(since 2020)

115

Email

University Profile Page

Københavns Universitet

Google Scholar

View Google Scholar Profile

Ole Winther Skills & Research Interests

machine learning

bioinformatics

deep learning

artificial intelligence

Top articles of Ole Winther

Title

Journal

Author(s)

Publication Date

DeepLocRNA: an interpretable deep learning model for predicting RNA subcellular localisation with domain-specific transfer-learning

Bioinformatics

Jun Wang

Marc Horlacher

Lixin Cheng

Ole Winther

2024/2/5

Can large language models reason about medical questions?

Patterns

Valentin Liévin

Christoffer Egeberg Hother

Andreas Geert Motzfeldt

Ole Winther

2024/3/8

Predicting the subcellular location of prokaryotic proteins with DeepLocPro

bioRxiv

Jaime Moreno

Henrik Nielsen

Ole Winther

Felix Teufel

2024

CURATOR: Building Robust Machine Learning Potentials for Atomistic Simulations Autonomously with Batch Active Learning

Xin Yang

Martin Hoffmann Petersen

Renata Sechi

William Sandholt Hansen

Sam Walton Norwood

...

2024/2/16

Implicit Transfer Operator Learning: Multiple Time-Resolution Models for Molecular Dynamics

Advances in Neural Information Processing Systems

Mathias Schreiner

Ole Winther

Simon Olsson

2024/2/13

Aligning Optimization Trajectories with Diffusion Models for Constrained Design Generation

Giorgio Giannone

Akash Srivastava

Ole Winther

Faez Ahmed

2023/5/29

DiscoTope-3.0: improved B-cell epitope prediction using inverse folding latent representations

bioRxiv

Magnus Haraldson Høie

Frederik Steensgaard Gade

Julie Maria Johansen

Charlotte Würtzen

Ole Winther

...

2023/2/5

DeepLoc 2.1: multi-label membrane protein type prediction using protein language models

Nucleic Acids Research

Marius Thrane Ødum

Felix Teufel

Vineet Thumuluri

José Juan Almagro Armenteros

Alexander Rosenberg Johansen

...

2024/4/8

Graph neural network interatomic potential ensembles with calibrated aleatoric and epistemic uncertainty on energy and forces

Physical Chemistry Chemical Physics

Jonas Busk

Mikkel N Schmidt

Ole Winther

Tejs Vegge

Peter Bjørn Jørgensen

2023

Transfer learning identifies sequence determinants of cell-type specific regulatory element accessibility

NAR genomics and bioinformatics

Marco Salvatore

Marc Horlacher

Annalisa Marsico

Ole Winther

Robin Andersson

2023/6/1

Explainable image quality assessments in teledermatological photography

Telemedicine and e-Health

Raluca Jalaboi

Ole Winther

Alfiia Galimzianova

2023/9/1

Unifying molecular and textual representations via multi-task language modelling

Dimitrios Christofidellis*

Giorgio Giannone*

Jannis Born

Ole Winther

Teodoro Laino

...

2023/1/29

DiffEnc: Variational Diffusion with a Learned Encoder

arXiv preprint arXiv:2310.19789

Beatrix MG Nielsen

Anders Christensen

Andrea Dittadi

Ole Winther

2023/10/30

Reconstructing the exit wave of 2D materials in high-resolution transmission electron microscopy using machine learning

Ultramicroscopy

Matthew Helmi Leth Larsen

Frederik Dahl

Lars P Hansen

Bastian Barton

Christian Kisielowski

...

2023/1/1

DermX: a Dermatological Diagnosis Explainability Dataset

Raluca Jalaboi

Mauricio Orbes Arteaga

Dan Richter Jørgensen

Ionela Manole

Oana Ionescu-Bozdog

...

2023/5/24

ThoughtSource: A central hub for large language model reasoning data

Nature Scientific Data

Simon Ott

Konstantin Hebenstreit

Valentin Liévin

Christoffer Egeberg Hother

Milad Moradi

...

2023

Variational open-domain question answering

Valentin Liévin

Andreas Geert Motzfeldt

Ida Riis Jensen

Ole Winther

2023/7/3

SecretoGen: towards prediction of signal peptides for efficient protein secretion

Felix Teufel

Carsten Stahlhut

Jan Refsgaard

Henrik Nielsen

Ole Winther

...

2023/10/27

Uncertainty-aware and explainable machine learning for early prediction of battery degradation trajectory

Digital Discovery

Laura Hannemose Rieger

Eibar Flores

Kristian Frellesen Nielsen

Poul Norby

Elixabete Ayerbe

...

2023

Deorphanizing peptides using structure prediction

Journal of chemical information and modeling

Felix Teufel

Jan C Refsgaard

Marina A Kasimova

Kristine Deibler

Christian T Madsen

...

2023/4/24

See List of Professors in Ole Winther University(Københavns Universitet)

Co-Authors

H-index: 129
Gunnar von Heijne

Gunnar von Heijne

Stockholms universitet

H-index: 121
Søren Brunak

Søren Brunak

Københavns Universitet

H-index: 85
Anders Krogh

Anders Krogh

Københavns Universitet

H-index: 70
Lars Kai Hansen

Lars Kai Hansen

Danmarks Tekniske Universitet

H-index: 66
Albin Sandelin

Albin Sandelin

Københavns Universitet

H-index: 43
Ricardo Henao

Ricardo Henao

Duke University

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