Nuno Bandeira
University of California, San Diego
H-index: 52
North America-United States
Top articles of Nuno Bandeira
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data | Nature Microbiology | Simone Zuffa Robin Schmid Anelize Bauermeister Paulo Wender P. Gomes Andres M Caraballo-Rodriguez | 2024/2/5 |
The 2023 Report on the Proteome from the HUPO Human Proteome Project | Gilbert S Omenn Lydie Lane Christopher M Overall Cecilia Lindskog Charles Pineau | 2024/1/17 | |
The ProteomeXchange consortium at 10 years: 2023 update | Nucleic acids research | Eric W Deutsch Nuno Bandeira Yasset Perez-Riverol Vagisha Sharma Jeremy J Carver | 2023/1/6 |
Proteomics standards initiative at twenty years: current activities and future work | Eric W Deutsch Juan Antonio Vizcaíno Andrew R Jones Pierre-Alain Binz Henry Lam | 2023/1/10 | |
Proteomics Standards Initiative’s ProForma 2.0: Unifying the encoding of proteoforms and peptidoforms | arXiv preprint arXiv:2109.11352 | Richard D LeDuc Eric W Deutsch Pierre-Alain Binz Ryan T Fellers Anthony J Cesnik | 2021/9/23 |
P-massive: a real-time search engine for a multi-terabyte mass spectrometry database | Narangerelt Batsoyol Benjamin Pullman Mingxun Wang Nuno Bandeira Steven Swanson | 2022/11/13 | |
GNPS Dashboard: collaborative exploration of mass spectrometry data in the web browser | Nature methods | Daniel Petras Vanessa V Phelan Deepa Acharya Andrew E Allen Allegra T Aron | 2022/2 |
The 2022 report on the human proteome from the HUPO human proteome project | Gilbert S Omenn Lydie Lane Christopher M Overall Charles Pineau Nicolle H Packer | 2022/11/1 | |
NPOmix: a machine learning classifier to connect mass spectrometry fragmentation data to biosynthetic gene clusters | PNAS nexus | Tiago F Leão Mingxun Wang Ricardo da Silva Alexey Gurevich Anelize Bauermeister | 2022/11 |
NPOmix 1: antiSMASH results from 1,040 PoDP paired samples | Tiago F Leao Mingxun Wang Ricardo Silva Alexey Gurevich Anelize Bauermeister | 2022/6/13 | |
Quick-start infrastructure for untargeted metabolomics analysis in GNPS | Nature metabolism | Tiago F Leao Chase M Clark Anelize Bauermeister Emmanuel O Elijah Emily C Gentry | 2021/7 |
A multi-omics characterization of the natural product potential of tropical filamentous marine cyanobacteria | Marine drugs | Tiago Leão Mingxun Wang Nathan Moss Ricardo da Silva Jon Sanders | 2021/1/6 |
Universal Spectrum Identifier for mass spectra | Nature methods | Eric W Deutsch Yasset Perez-Riverol Jeremy Carver Shin Kawano Luis Mendoza | 2021/7 |
Data management of sensitive human proteomics data: current practices, recommendations, and perspectives for the future | Molecular & Cellular Proteomics | Nuno Bandeira Eric W Deutsch Oliver Kohlbacher Lennart Martens Juan Antonio Vizcaíno | 2021/1/1 |
GNPS Dashboard: collaborative analysis of mass spectrometry data in the web browser | Biorxiv | Daniel Petras Vanessa V Phelan Deepa Acharya Andrew E Allen Allegra T Aron | 2021/4/6 |
Index-based, high-dimensional, cosine threshold querying with optimality guarantees | Theory of Computing Systems | Yuliang Li Jianguo Wang Benjamin Pullman Nuno Bandeira Yannis Papakonstantinou | 2021/1 |
Progress identifying and analyzing the human proteome: 2021 metrics from the HUPO human proteome project | Journal of proteome research | Gilbert S Omenn Lydie Lane Christopher M Overall Young-Ki Paik Ileana M Cristea | 2021/10/20 |
A proteomics sample metadata representation for multiomics integration and big data analysis | Chengxin Dai Anja Füllgrabe Julianus Pfeuffer Elizaveta M Solovyeva Jingwen Deng | 2021/10/6 | |
PSI Recommendation PSI Mass Spectrometry and Proteomics Informatics Working Groups Status: DRAFT Date: 25 March 2021 Title: MAGE-TAB Proteomics: Sample and Data Relationship … | Chengxin Dai Anja Fullgrabe Marc Vaudel Stefan Schulze Veit Schwämmle | 2021/3/25 | |
USI: a universal spectrum identifier for mass spectrometry | PSI Recommendation | Eric W Deutsch Juan Antonio Vizcaíno Yasset Perez-Riverol Jeremy Carver Pierre-Alain Binz | 2021/7/22 |
