Nathan E Lewis

Nathan E Lewis

University of California, San Diego

H-index: 57

North America-United States

About Nathan E Lewis

Nathan E Lewis, With an exceptional h-index of 57 and a recent h-index of 51 (since 2020), a distinguished researcher at University of California, San Diego, specializes in the field of computational biology, systems biology, omics, biotechnology.

His recent articles reflect a diverse array of research interests and contributions to the field:

Computational cell–cell interaction technologies drive mechanistic and biomarker discovery in the tumor microenvironment

The Effect of Hospital Boarding on Emergency Medicine Resident Productivity

The diversification of methods for studying cell–cell interactions and communication

Mechanotransduction Induced Interplay between Phospholamban and Yes Activated Protein Induces Smooth Muscle Cell Hypertrophy

Resource allocation in mammalian systems

COSMIC-dFBA: A novel multi-scale hybrid framework for bioprocess modeling

Glycoengineered recombinant alpha1-antitrypsin results in comparablein vitroandin vivoactivities to human plasma-derived protein

LeGenD: determining N-glycoprofiles using an explainable AI-leveraged model with lectin profiling

Nathan E Lewis Information

University

Position

Associate Professor

Citations(all)

18346

Citations(since 2020)

11763

Cited By

11012

hIndex(all)

57

hIndex(since 2020)

51

i10Index(all)

128

i10Index(since 2020)

124

Email

University Profile Page

University of California, San Diego

Google Scholar

View Google Scholar Profile

Nathan E Lewis Skills & Research Interests

computational biology

systems biology

omics

biotechnology

Top articles of Nathan E Lewis

Title

Journal

Author(s)

Publication Date

Computational cell–cell interaction technologies drive mechanistic and biomarker discovery in the tumor microenvironment

Avery Pong

Clarence K Mah

Gene W Yeo

Nathan E Lewis

2024/2/1

The Effect of Hospital Boarding on Emergency Medicine Resident Productivity

Western Journal of Emergency Medicine: Integrating Emergency Care with Population Health

Peter Moffett

Laura Barrera

Grace Hickam

Scott Huange

Hannah Kissel-Smith

...

2024/3/21

The diversification of methods for studying cell–cell interactions and communication

Erick Armingol

Hratch M Baghdassarian

Nathan E Lewis

2024/1/18

Mechanotransduction Induced Interplay between Phospholamban and Yes Activated Protein Induces Smooth Muscle Cell Hypertrophy

Mucosal Immunology

Renee Rawson

Loan Duong

Eugene Tkachenko

Austin WT Chiang

Kevin Okamoto

...

2024/2/27

Resource allocation in mammalian systems

Hratch M Baghdassarian

Nathan E Lewis

2024/1/11

COSMIC-dFBA: A novel multi-scale hybrid framework for bioprocess modeling

Metabolic Engineering

Saratram Gopalakrishnan

William Johnson

Miguel A Valderrama-Gomez

Elcin Icten

Jasmine Tat

...

2024/2/20

Glycoengineered recombinant alpha1-antitrypsin results in comparablein vitroandin vivoactivities to human plasma-derived protein

F Rocamora

S Schoffelen

J Arnsdorf

EA Toth

Y Abdul

...

2024/3/30

LeGenD: determining N-glycoprofiles using an explainable AI-leveraged model with lectin profiling

bioRxiv

Haining Li

Angelo G Peralta

Sanne Schoffelen

Anders Holmgaard Hansen

Johnny Arnsdorf

...

2024

Predicting pathways for old and new metabolites through clustering

Journal of Theoretical Biology

Thiru Siddharth

Nathan E Lewis

2024/2/7

Driving towards digital biomanufacturing by CHO genome-scale models

Seo-Young Park

Dong-Hyuk Choi

Jinsung Song

Meiyappan Lakshmanan

Anne Richelle

...

2024/3/27

Inferring secretory and metabolic pathway activity from omic data with secCellFie

Metabolic Engineering

Helen O Masson

Mojtaba Samoudi

Caressa M Robinson

Chih-Chung Kuo

Linus Weiss

...

2024/1/1

LipidSIM: Inferring mechanistic lipid biosynthesis perturbations from lipidomics with a flexible, low-parameter, markov modeling framework

Metabolic Engineering

Chenguang Liang

Sue Murray

Yang Li

Richard Lee

Audrey Low

...

2024/2/2

Methods to stabilize mammalian cells

2024/3/21

Reconstructing the cell–cell interaction network among mouse immune cells

Biotechnology and Bioengineering

Somayeh Azadian

Alireza Doustmohammadi

Mohadeseh Naseri

Masoud Khodarahmi

Seyed Shahriar Arab

...

2023/9

Dissecting the properties of circulating IgG against Group A Streptococcus through a combined systems antigenomics-serology workflow

J Malmstrom

S Chowdhury

E Hjortswang

JT Sorrentino

NE Lewis

...

2023/11/9

Multi-omic characterization of antibody-producing CHO cell lines elucidates metabolic reprogramming and nutrient uptake bottlenecks

bioRxiv

Saratram Gopalakrishnan

William Johnson

Miguel A Valderrama Gomez

Elcin Icten

Jasmine Tat

...

2023

Mitigating biomass composition uncertainties in flux balance analysis using ensemble representations

Computational and Structural Biotechnology Journal

Yoon-Mi Choi

Dong-Hyuk Choi

Yi Qing Lee

Lokanand Koduru

Nathan E Lewis

...

2023/7/23

ImmCellFie: A user-friendly web-based platform to infer metabolic function from omics data

STAR protocols

Helen O Masson

David Borland

Jason Reilly

Adrian Telleria

Shalki Shrivastava

...

2023/3/17

Variant STAT4 and Response to Ruxolitinib in an Autoinflammatory Syndrome

New England Journal of Medicine

Hratch Baghdassarian

Sarah A Blackstone

Owen S Clay

Rachael Philips

Brynja Matthiasardottir

...

2023/6/15

Whole-body gene expression atlas of an adult metazoan

Science advances

Abbas Ghaddar

Erick Armingol

Chau Huynh

Louis Gevirtzman

Nathan E Lewis

...

2023/6/23

See List of Professors in Nathan E Lewis University(University of California, San Diego)

Co-Authors

H-index: 202
George Church

George Church

Harvard University

H-index: 175
Bernhard Palsson

Bernhard Palsson

University of California, San Diego

H-index: 75
Michael Betenbaugh

Michael Betenbaugh

Johns Hopkins University

H-index: 60
Gyun Min Lee

Gyun Min Lee

KAIST

H-index: 59
Karen Pierce

Karen Pierce

University of California, San Diego

H-index: 21
Vahid H Gazestani

Vahid H Gazestani

Harvard University

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