Mika Gustafsson
Linköpings Universitet
H-index: 21
Europe-Sweden
Top articles of Mika Gustafsson
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
scDrugPrio: a framework for the analysis of single-cell transcriptomics to address multiple problems in precision medicine in immune-mediated inflammatory diseases | Genome Medicine | Samuel Schäfer Martin Smelik Oleg Sysoev Yelin Zhao Desiré Eklund | 2024/3/20 |
Cholinergic regulation of vascular endothelial function by human ChAT+ T cells | Proceedings of the National Academy of Sciences | Laura Tarnawski Vladimir S Shavva Eric J Kort Zhengbing Zhuge Ingrid Nilsson | 2023/4/4 |
Deep learning genome-wide genetics through biregular sparse decoder layer: deriving new disease genetic associations and disease risk predictions | Mika Gustafsson Sanjiv Dwivedi Sandra Hellberg Leonid Padyukov Rebecka Jornsten | 2023/12/11 | |
Representational Learning from Healthy Multi-Tissue Human RNA-seq Data such that Latent Space Arithmetics Extracts Disease Modules | bioRxiv | Hendrik Arnold de Weerd Dimitri Guala Mika Gustafsson Jane Synnergren Jesper Tegner | 2023 |
Proteomics reveal biomarkers for diagnosis, disease activity and long-term disability outcomes in multiple sclerosis | Nature Communications | Julia Åkesson Sara Hojjati Sandra Hellberg Johanna Raffetseder Mohsen Khademi | 2023/10/30 |
NCAE: data-driven representations using a deep network-coherent DNA methylation autoencoder identify robust disease and risk factor signatures | Briefings in Bioinformatics | David Martínez-Enguita Sanjiv K Dwivedi Rebecka Jörnsten Mika Gustafsson | 2023/9 |
A comprehensive mechanistic model of adipocyte signaling with layers of confidence | npj Systems Biology and Applications | William Lövfors Rasmus Magnusson Cecilia Jönsson Mika Gustafsson Charlotta S Olofsson | 2023/6/7 |
Prominent epigenetic and transcriptomic changes in CD4+ and CD8+ T cells during and after pregnancy in women with multiple sclerosis and controls | Journal of Neuroinflammation | Alberto Zenere Sandra Hellberg Georgia Papapavlou Lingehed Maria Svenvik Johan Mellergård | 2023/4/27 |
Multi-omics protein-coding units as massively parallel Bayesian networks: Empirical validation of causality structure | Iscience | Alberto Zenere Olof Rundquist Mika Gustafsson Claudio Altafini | 2022/4/15 |
Deep neural network prediction of genome-wide transcriptome signatures–beyond the Black-box | npj Systems Biology and Applications | Rasmus Magnusson Jesper N Tegnér Mika Gustafsson | 2022/2/23 |
CD4+ T-cell DNA methylation changes during pregnancy significantly correlate with disease-associated methylation changes in autoimmune diseases | Epigenetics | Tejaswi V Badam Sandra Hellberg Ratnesh B Mehta Jeannette Lechner-Scott Rodney A Lea | 2022/9/2 |
Progesterone inhibits the establishment of activation-associated chromatin during TH1 differentiation | Frontiers in immunology | Olof Rundquist Colm E Nestor Maria C Jenmalm Sandra Hellberg Mika Gustafsson | 2022/2/2 |
RNA-sequencing and mass-spectrometry proteomic time-series analysis of T-cell differentiation identified multiple splice variants models that predicted validated protein … | Frontiers in Molecular Biosciences | Rasmus Magnusson Olof Rundquist Min Jung Kim Sandra Hellberg Chan Hyun Na | 2022/8/29 |
MODalyseR—a novel software for inference of disease module hub regulators identified a putative multiple sclerosis regulator supported by independent eQTL data | Bioinformatics Advances | Hendrik A de Weerd Julia Åkesson Dimitri Guala Mika Gustafsson Zelmina Lubovac-Pilav | 2022/1/1 |
Plasma protein profiling reveals dynamic immunomodulatory changes in multiple sclerosis patients during pregnancy | Frontiers in Immunology | Georgia Papapavlou Lingehed Sandra Hellberg Jesse Huang Mohsen Khademi Ingrid Kockum | 2022/7/29 |
Using high-throughput multi-omics data to investigate structural balance in elementary gene regulatory network motifs | Bioinformatics | Alberto Zenere Olof Rundquist Mika Gustafsson Claudio Altafini | 2022/1/1 |
Implication of DNA methylation changes at chromosome 1q21. 1 in the brain pathology of Primary Progressive Multiple Sclerosis | medRxiv | Majid Pahlevan Kakhki Chiara Starvaggi Cucuzza Antonino Giordano Tejaswi Venkata S Badam Pernilla Strid | 2022/5/7 |
Progesterone dampens immune responses in in vitro activated CD4+ T cells and affects genes associated with autoimmune diseases that improve during pregnancy | Frontiers in Immunology | Sandra Hellberg Johanna Raffetseder Olof Rundquist Rasmus Magnusson Georgia Papapavlou | 2021/5/12 |
Combined prenatal Lactobacillus reuteri and ω-3 supplementation synergistically modulates DNA methylation in neonatal T helper cells | Clinical Epigenetics | Johanna Huoman David Martínez-Enguita Elin Olsson Jan Ernerudh Lennart Nilsson | 2021/12 |
Jesper Tegnér, Ingrid Kockum, Mika Gustafsson and | Networks of Networks in Biology: Concepts, Tools and Applications | David Gomez-Cabrero | 2021/4/1 |
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