Matthew W. Hahn

Matthew W. Hahn

Indiana University Bloomington

H-index: 82

North America-United States

About Matthew W. Hahn

Matthew W. Hahn, With an exceptional h-index of 82 and a recent h-index of 60 (since 2020), a distinguished researcher at Indiana University Bloomington, specializes in the field of Evolution, Population genetics, Molecular evolution, Phylogenetics, Bioinformatics.

His recent articles reflect a diverse array of research interests and contributions to the field:

The meaning and measure of concordance factors in phylogenomics

Phylotranscriptomics reveals convergent behavioral evolution associated with shared and unique mechanisms in cavity-nesting songbirds

A haplotype-resolved reference genome of Quercus alba sheds light on the evolutionary history of oaks

A comprehensive examination of Chelicerate genomes reveals no evidence for a whole genome duplication among spiders and scorpions

Applications of machine learning in phylogenetics

MAST: Phylogenetic inference with mixtures across sites and trees

Searching and visualizing genetic associations of pregnancy traits by using GnuMoM2b

Selection leads to false inferences of introgression using popular methods

Matthew W. Hahn Information

University

Position

Distinguished Professor of Biology and Computer Science

Citations(all)

31118

Citations(since 2020)

13744

Cited By

23192

hIndex(all)

82

hIndex(since 2020)

60

i10Index(all)

159

i10Index(since 2020)

132

Email

University Profile Page

Indiana University Bloomington

Google Scholar

View Google Scholar Profile

Matthew W. Hahn Skills & Research Interests

Evolution

Population genetics

Molecular evolution

Phylogenetics

Bioinformatics

Top articles of Matthew W. Hahn

Title

Journal

Author(s)

Publication Date

The meaning and measure of concordance factors in phylogenomics

Rob Lanfear

Matthew Hahn

2024/1/3

Phylotranscriptomics reveals convergent behavioral evolution associated with shared and unique mechanisms in cavity-nesting songbirds

bioRxiv

Sara E Lipshutz

Mark S Hibbins

Alexandra B Bentz

Aaron M Buechlin

Tara A Empson

...

2024

A haplotype-resolved reference genome of Quercus alba sheds light on the evolutionary history of oaks

bioRxiv

Drew A Larson

Margaret E Staton

Beant Kapoor

Nurul Faridi

Tetyana Zhebentyayeva

...

2024

A comprehensive examination of Chelicerate genomes reveals no evidence for a whole genome duplication among spiders and scorpions

bioRxiv

Gregg WC Thomas

Michael TW McKibben

Matthew W Hahn

Michael S Barker

2024

Applications of machine learning in phylogenetics

Molecular Phylogenetics and Evolution

Yu K Mo

Matthew W Hahn

Megan L Smith

2024/3/31

MAST: Phylogenetic inference with mixtures across sites and trees

Systematic Biology

Thomas KF Wong

Caitlin Cherryh

Allen G Rodrigo

Matthew W Hahn

Bui Quang Minh

...

2024/2/29

Searching and visualizing genetic associations of pregnancy traits by using GnuMoM2b

Genetics

Qi Yan

Rafael F Guerrero

Raiyan R Khan

Andy A Surujnarine

Ronald J Wapner

...

2023/10

Selection leads to false inferences of introgression using popular methods

bioRxiv

Megan L Smith

Matthew W Hahn

2023

Phylogenetic inference using generative adversarial networks

Bioinformatics

Megan L Smith

Matthew W Hahn

2023/9/1

Local adaptation of a marine diatom is governed by genome-wide changes in diverse metabolic processes

bioRxiv

Eveline Pinseel

Elizabeth C Ruck

Teofil Nakov

Per R Jonsson

Olga Kourtchenko

...

2023

Phylogenomic comparative methods: Accurate evolutionary inferences in the presence of gene tree discordance

PNAS

Mark Stephen Hibbins

Lara C Breithaupt

Matthew W Hahn

2023/5

Robust inference of historical human generation times

bioRxiv

Richard J Wang

Jeffrey Rogers

Matthew W Hahn

2023

CAGEE: computational analysis of gene expression evolution

Molecular Biology and Evolution

Jason Bertram

Ben Fulton

Jason P Tourigny

Yadira Peña-Garcia

Leonie C Moyle

...

2023/5/9

Updated site concordance factors minimize effects of homoplasy and taxon sampling

Bioinformatics

Yu K Mo

Robert Lanfear

Matthew W Hahn

Bui Quang Minh

2023/1/1

Human generation times across the past 250,000 years

Science Advances

Richard J Wang

Samer I Al-Saffar

Jeffrey Rogers

Matthew W Hahn

2023/1/6

The ‘faulty male’hypothesis for sex-biased mutation and disease

Current Biology

Matthew W Hahn

Yadira Peña-Garcia

Richard J Wang

2023/11/20

reconcILS: A gene tree-species tree reconciliation algorithm that allows for incomplete lineage sorting

bioRxiv

Sarthak Mishra

Megan L Smith

Matthew W Hahn

2023

Genetic Polymorphisms Associated with Adverse Pregnancy Outcomes in Nulliparas

medRxiv

Rafael F Guerrero

Raiyan R Khan

Ronald J Wapner

Matthew W Hahn

Anita Raja

...

2022/3/1

The frequency and topology of pseudoorthologs

Systematic Biology

Megan L Smith

Matthew W Hahn

2022/5

High-resolution phylogenetic and population genetic analysis of microbial communities with RoC-ITS

ISME communications

Douglas B Rusch

Jie Huang

Chris Hemmerich

Matthew W Hahn

2022/12

See List of Professors in Matthew W. Hahn University(Indiana University Bloomington)