Mathieu Blanchette

Mathieu Blanchette

McGill University

H-index: 55

North America-Canada

About Mathieu Blanchette

Mathieu Blanchette, With an exceptional h-index of 55 and a recent h-index of 31 (since 2020), a distinguished researcher at McGill University, specializes in the field of Bioinformatics, genomics, evolution.

His recent articles reflect a diverse array of research interests and contributions to the field:

Posterior inference of Hi-C contact frequency through sampling

Graphylo: A deep learning approach for predicting regulatory DNA and RNA sites from whole-genome multiple alignments

PERFUMES: pipeline to extract RNA functional motifs and exposed structures

Multi-ancestry polygenic risk scores using phylogenetic regularization

Improving microbial phylogeny with citizen science within a mass-market video game

PhyloGFN: Phylogenetic inference with generative flow networks

Large-scale genomic analyses with machine learning uncover predictive patterns associated with fungal phytopathogenic lifestyles and traits

Reference panel-guided super-resolution inference of Hi-C data

Mathieu Blanchette Information

University

Position

Professor of Computer Science

Citations(all)

15222

Citations(since 2020)

4084

Cited By

14416

hIndex(all)

55

hIndex(since 2020)

31

i10Index(all)

114

i10Index(since 2020)

74

Email

University Profile Page

Google Scholar

Mathieu Blanchette Skills & Research Interests

Bioinformatics

genomics

evolution

Top articles of Mathieu Blanchette

Title

Journal

Author(s)

Publication Date

Posterior inference of Hi-C contact frequency through sampling

Frontiers in Bioinformatics

Yanlin Zhang

Christopher JF Cameron

Mathieu Blanchette

2024/2/22

Graphylo: A deep learning approach for predicting regulatory DNA and RNA sites from whole-genome multiple alignments

Iscience

Dongjoon Lim

Changhyun Baek

Mathieu Blanchette

2024/2/16

PERFUMES: pipeline to extract RNA functional motifs and exposed structures

Bioinformatics

Arnaud Chol

Roman Sarrazin-Gendron

Éric Lécuyer

Mathieu Blanchette

Jérôme Waldispühl

2024/2/1

Multi-ancestry polygenic risk scores using phylogenetic regularization

bioRxiv

Elliot Layne

Shadi Zabad

Yue Li

Mathieu Blanchette

2024

Improving microbial phylogeny with citizen science within a mass-market video game

Nature Biotechnology

Roman Sarrazin-Gendron

Parham Ghasemloo Gheidari

Alexander Butyaev

Timothy Keding

Eddie Cai

...

2024/4/15

PhyloGFN: Phylogenetic inference with generative flow networks

arXiv preprint arXiv:2310.08774

Mingyang Zhou

Zichao Yan

Elliot Layne

Nikolay Malkin

Dinghuai Zhang

...

2023/10/12

Large-scale genomic analyses with machine learning uncover predictive patterns associated with fungal phytopathogenic lifestyles and traits

Scientific Reports

EN Dort

Elliot Layne

Nicolas Feau

Alexander Butyaev

Bernard Henrissat

...

2023/10/11

Reference panel-guided super-resolution inference of Hi-C data

Bioinformatics

Yanlin Zhang

Mathieu Blanchette

2023/6/1

Playing the System: Can Puzzle Players Teach us How to Solve Hard Problems?

Renata Mutalova

Roman Sarrazin-Gendron

Eddie Cai

Gabriel Richard

Parham Ghasemloo Gheidari

...

2023/4/19

H3K27me3 spreading organizes canonical PRC1 chromatin architecture to regulate developmental programs

bioRxiv

Brian Krug

Bo Hu

Haifen Chen

Adam Ptack

Xiao Chen

...

2023

Player-Guided AI outperforms standard AI in Sequence Alignment Puzzles

Renata Mutalova

Roman Sarrazin-Gendron

Parham Ghasemloo Gheidari

Eddie Cai

Gabriel Richard

...

2023/11/6

Detection and genomic analysis of BRAF fusions in Juvenile Pilocytic Astrocytoma through the combination and integration of multi-omic data

BMC cancer

Melissa Zwaig

Audrey Baguette

Bo Hu

Michael Johnston

Hussein Lakkis

...

2022/12/12

Leveraging Structure Between Environments: Phylogenetic Regularization Incentivizes Disentangled Representations

Elliot Layne

Dhanya Sridhar

Jason Hartford

Mathieu Blanchette

2022/7/9

Reference panel guided topological structure annotation of Hi-C data

Nature Communications

Yanlin Zhang

Mathieu Blanchette

2022/12/2

PhyloPGM: boosting regulatory function prediction accuracy using evolutionary information

Bioinformatics

Faizy Ahsan

Zichao Yan

Doina Precup

Mathieu Blanchette

2022/7/1

K27M in canonical and noncanonical H3 variants occurs in distinct oligodendroglial cell lineages in brain midline gliomas

Nature genetics

Selin Jessa

Abdulshakour Mohammadnia

Ashot S Harutyunyan

Maud Hulswit

Srinidhi Varadharajan

...

2022/12

Reconstruction of full-length LINE-1 progenitors from ancestral genomes

Genetics

Laura F Campitelli

Isaac Yellan

Mihai Albu

Marjan Barazandeh

Zain M Patel

...

2022/7/1

EPCO-38. TYPE B ULTRA LONG-RANGE INTERACTIONS IN PFAS (TULIPS) ARE RECURRENT EPIGENOMIC FEATURES OF PFA EPENDYMOMA

Neuro-Oncology

Michael Johnston

John JY Lee

Bo Hu

Ana Nikolic

Audrey Baguette

...

2022/11/1

Integrated pretraining with evolutionary information to improve RNA secondary structure prediction

bioRxiv

Zichao Yan

William Hamilton

Mathieu Blanchette

2022/1/28

Leishmania parasites exchange drug-resistance genes through extracellular vesicles

Cell Reports

Noelie Douanne

George Dong

Atia Amin

Lorena Bernardo

Mathieu Blanchette

...

2022/7/19

See List of Professors in Mathieu Blanchette University(McGill University)