Marie-Dominique Devignes

Marie-Dominique Devignes

Université de Lorraine

H-index: 29

Europe-France

About Marie-Dominique Devignes

Marie-Dominique Devignes, With an exceptional h-index of 29 and a recent h-index of 19 (since 2020), a distinguished researcher at Université de Lorraine, specializes in the field of bioinformatique, extraction de connaissances, interactions protéine-proteine.

His recent articles reflect a diverse array of research interests and contributions to the field:

Molecular-evaluated and explainable drug repurposing for COVID-19 using ensemble knowledge graph embedding

Supporting information for the RNAct Data Science Wizard (DSW) knowledge model for early-stage researchers

HLA-EpiCheck: A B-cell epitope prediction tool for HLA proteins using molecular dynamics simulation data.

CroMaSt: a workflow for assessing protein domain classification by cross-mapping of structural instances between domain databases and structural alignment

FAIR-Checker: supporting digital resource findability and reuse with Knowledge Graphs and Semantic Web standards

Experiences with a training DSW knowledge model for early-stage researchers

Improving automatic GO annotation with semantic similarity

A semi-supervised graph deep neural network for automatic protein function annotation

Marie-Dominique Devignes Information

University

Position

CNRS, LORIA UMR7503

Citations(all)

4115

Citations(since 2020)

1948

Cited By

2916

hIndex(all)

29

hIndex(since 2020)

19

i10Index(all)

60

i10Index(since 2020)

29

Email

University Profile Page

Université de Lorraine

Google Scholar

View Google Scholar Profile

Marie-Dominique Devignes Skills & Research Interests

bioinformatique

extraction de connaissances

interactions protéine-proteine

Top articles of Marie-Dominique Devignes

Title

Journal

Author(s)

Publication Date

Molecular-evaluated and explainable drug repurposing for COVID-19 using ensemble knowledge graph embedding

Scientific Reports

Md Kamrul Islam

Diego Amaya-Ramirez

Bernard Maigret

Marie-Dominique Devignes

Sabeur Aridhi

...

2023/3/4

Supporting information for the RNAct Data Science Wizard (DSW) knowledge model for early-stage researchers

Wim Vranken

Marie-Dominique Devignes

Malika Smaïl-Tabbone

2023

HLA-EpiCheck: A B-cell epitope prediction tool for HLA proteins using molecular dynamics simulation data.

bioRxiv

Diego Amaya-Ramirez

Magali Devriese

Romain Lhotte

Cedric Usureau

Malika Smail-Tabbone

...

2023

CroMaSt: a workflow for assessing protein domain classification by cross-mapping of structural instances between domain databases and structural alignment

Bioinformatics Advances

Hrishikesh Dhondge

Isaure Chauvot de Beauchêne

Marie-Dominique Devignes

2023/1/1

FAIR-Checker: supporting digital resource findability and reuse with Knowledge Graphs and Semantic Web standards

Journal of Biomedical Semantics

Alban Gaignard

Thomas Rosnet

Frédéric De Lamotte

Vincent Lefort

Marie-Dominique Devignes

2023/7/1

Experiences with a training DSW knowledge model for early-stage researchers

Open Research Europe

Marie-Dominique Devignes

Malika Smaïl-Tabbone

Hrishikesh Dhondge

Roswitha Dolcemascolo

Jose Gavaldá-García

...

2023

Improving automatic GO annotation with semantic similarity

BMC bioinformatics

Bishnu Sarker

Navya Khare

Marie-Dominique Devignes

Sabeur Aridhi

2022/12/12

A semi-supervised graph deep neural network for automatic protein function annotation

Akrem Sellami

Bishnu Sarker

Salvatore Tabbone

Marie-Dominique Devignes

Sabeur Aridhi

2022/6/8

FAIR-Checker: Checking and Inspecting metadata for FAIR bioinformatics resources

Thomas Rosnet

F de Lamotte

Marie-Dominique Devignes

Vincent Lefort

A Gaignard

2022/6/7

NT-proBNP and stem cell factor plasma concentrations are independently associated with cardiovascular outcomes in end-stage renal disease hemodialysis patients

European heart journal open

P Rossignol

K Duarte

E Bresso

MD Devignes

N Eriksson

...

2022/11/1

Singular interface dynamics of the SARS-CoV-2 delta variant explained with contact perturbation analysis

Journal of chemical information and modeling

Aria Gheeraert

Laurent Vuillon

Laurent Chaloin

Olivier Moncorgé

Thibaut Very

...

2022/6/6

Inductive database to support iterative data mining: Application to biomarker analysis on patient data in the Fight-HF project

Journal of Biomedical Informatics

Emmanuel Bresso

Joao-Pedro Ferreira

Nicolas Girerd

Masatake Kobayashi

Grégoire Preud’homme

...

2022/11/1

Steps towards causal formal concept analysis

International Journal of Approximate Reasoning

Alexandre Bazin

Miguel Couceiro

Marie-Dominique Devignes

Amedeo Napoli

2022/3/1

Reduced structural flexibility of eplet amino acids in HLA proteins

Diego Amaya-Ramirez

Romain Lhotte

Magali Devriese

Constantin Hays

Jean-Luc Taupin

...

2022/9/12

On the design of a similarity function for sparse binary data with application on protein function annotation

Knowledge-Based Systems

Marcelo BA Veras

Bishnu Sarker

Sabeur Aridhi

João PP Gomes

José AF Macêdo

...

2022/2/28

CroMaSt: A workflow for domain family curation through cross-mapping of structural instances between protein domain databases

Hrishikesh Dhondge

Isaure Chauvot de Beauchêne

Marie-Dominique Devignes

2022/9/12

Machine learning-derived echocardiographic phenotypes predict heart failure incidence in asymptomatic individuals

Cardiovascular Imaging

Masatake Kobayashi

Olivier Huttin

Martin Magnusson

João Pedro Ferreira

Erwan Bozec

...

2022/2/1

FAIR-checker-supporting the findability and reusability of digital life science resources

T Rosnet

F de Lamotte

MD Devignes

V Lefort

A Gaignard

2021

A Hybrid Approach to Identifying the Most Predictive and Discriminant Features in Supervised Classification Problems

Alexandre Bazin

Miguel Couceiro

Marie-Dominique Devignes

Amedeo Napoli

2021/9/20

An approach to identifying the most predictive and discriminant features in supervised classification problems

Alexandre Bazin

Miguel Couceiro

Marie-Dominique Devignes

Amedeo Napoli

2021

See List of Professors in Marie-Dominique Devignes University(Université de Lorraine)