Macha Nikolski

About Macha Nikolski

Macha Nikolski, With an exceptional h-index of 27 and a recent h-index of 19 (since 2020), a distinguished researcher at Université de Bordeaux, specializes in the field of Bioinformatics, Computational Biology.

His recent articles reflect a diverse array of research interests and contributions to the field:

THBS1+ myeloid cells expand in SLD hepatocellular carcinoma and contribute to immunosuppression and unfavorable prognosis through TREM1

Roadmap for a European cancer data management and precision medicine infrastructure

Exploiting a metabolic vulnerability in brain tumour stem cells using a brain-penetrant drug with safe profile

Single cell tracing of Pomc neurons reveals recruitment of ‘Ghost’subtypes with atypical identity in a mouse model of obesity

DIMet: An open-source tool for Differential analysis of targeted Isotope-labeled Metabolomics data

Transgenerational endocrine disruptor effects of cadmium in zebrafish and contribution of standing epigenetic variation to adaptation

Synthesis of Flavonol-Bearing Probes for Chemoproteomic and Bioinformatic Analyses of Asteraceae Petals in Search of Novel Flavonoid Enzymes

268 Single-cell analysis of skin pre-cancerous and cancerous lesions reveals differences in their metabolic profile and immune cell types

Macha Nikolski Information

University

Position

CNRS IBGC / CBiB -

Citations(all)

5075

Citations(since 2020)

1523

Cited By

4103

hIndex(all)

27

hIndex(since 2020)

19

i10Index(all)

44

i10Index(since 2020)

28

Email

University Profile Page

Google Scholar

Macha Nikolski Skills & Research Interests

Bioinformatics

Computational Biology

Top articles of Macha Nikolski

Title

Journal

Author(s)

Publication Date

THBS1+ myeloid cells expand in SLD hepatocellular carcinoma and contribute to immunosuppression and unfavorable prognosis through TREM1

Cell Reports

Julie Giraud

Domitille Chalopin

Eloïse Ramel

Thomas Boyer

Atika Zouine

...

2024/2/12

Roadmap for a European cancer data management and precision medicine infrastructure

Nature Cancer

Macha Nikolski

Eivind Hovig

Fatima Al-Shahrour

Niklas Blomberg

Serena Scollen

...

2024/2/6

Exploiting a metabolic vulnerability in brain tumour stem cells using a brain-penetrant drug with safe profile

bioRxiv

Audrey Burban

Cloe Tessier

Mathis Pinglaut

Joris Guyon

Johanna Galvis

...

2024

Single cell tracing of Pomc neurons reveals recruitment of ‘Ghost’subtypes with atypical identity in a mouse model of obesity

Nature Communications

Stéphane Leon

Vincent Simon

Thomas H Lee

Lukas Steuernagel

Samantha Clark

...

2024/4/24

DIMet: An open-source tool for Differential analysis of targeted Isotope-labeled Metabolomics data

Bioinformatics

Johanna Galvis

Joris Guyon

Benjamin Dartigues

Helge Hecht

Björn Grüning

...

2024/4/24

Transgenerational endocrine disruptor effects of cadmium in zebrafish and contribution of standing epigenetic variation to adaptation

Journal of Hazardous Materials

Fabien Pierron

Guillemine Daffe

Flore Daramy

Débora Heroin

Aurélien Barré

...

2023/8/5

Synthesis of Flavonol-Bearing Probes for Chemoproteomic and Bioinformatic Analyses of Asteraceae Petals in Search of Novel Flavonoid Enzymes

International Journal of Molecular Sciences

Karl Kempf

Oxana Kempf

Yoan Capello

Christian Molitor

Claire Lescoat

...

2023/6/3

268 Single-cell analysis of skin pre-cancerous and cancerous lesions reveals differences in their metabolic profile and immune cell types

Journal of Investigative Dermatology

L Dousset

V Bashynska

J Guegan

B Fanny

M Saleh

...

2023/5/1

Effects of lumacaftor-ivacaftor on airway microbiota-mycobiota and inflammation in patients with cystic fibrosis appear to be linked to pseudomonas aeruginosa chronic colonization

Microbiology Spectrum

Raphael Enaud

Florian Lussac-Sorton

Elena Charpentier

Lourdes Velo-Suárez

Jennifer Guiraud

...

2023/4/13

Sex-specific DNA methylation and transcription of zbtb38 and effects of gene–environment interactions on its natural antisense transcript in zebrafish

Epigenetics

Fabien Pierron

Flore Daramy

Débora Heroin

Guillemine Daffe

Aurélien Barré

...

2023/12/31

Systemic Convergent Multitarget Interactions of Plant Polyphenols Revealed by Affinity-Based Protein Profiling of Bone Cells Using C-Glucosidic Vescal(ag)in …

ACS Chemical Biology

Karl Kempf

Yoan Capello

Rana Melhem

Claire Lescoat

Oxana Kempf

...

2023/11/10

P02. 05 How proton pump inhibitors blunt immune checkpoint inhibitors efficacy: a role of the microbiome?

E Ramel

M Masson

D Challopin

A Barre

M Nikolski

...

2022/9/1

TREM1+ regulatory myeloid cells expand in steatohepatitis-HCC and associate with poor prognosis and therapeutic resistance to immune checkpoint blockade

bioRxiv

Julie Giraud

Domitille Chalopin

Eloïse Ramel

Thomas Boyer

Atika Zouine

...

2022/11/10

Genetic and epigenetic interplay allows rapid transgenerational adaptation to metal pollution in zebrafish

Environmental Epigenetics

Fabien Pierron

Débora Heroin

Guillemine Daffe

Flore Daramy

Aurélien Barré

...

2022/1/1

SalienceNet: an unsupervised Image-to-Image translation method for nuclei saliency enhancement in microscopy images

bioRxiv

Bouilhol Emmanuel

Edgar Lefevre

Thierno Barry

Florian Levet

Anne Beghin

...

2022/10/28

DeepSpot: A deep neural network for RNA spot enhancement in smFISH microscopy images

Biological Imaging

Emmanuel Bouilhol

Anca F Savulescu

Edgar Lefevre

Benjamin Dartigues

Robyn Brackin

...

2022/1

Deep learning model for automatic segmentation of lungs and pulmonary metastasis in small animal MR images

Frontiers in Bioinformatics

Edgar Lefevre

Emmanuel Bouilhol

Antoine Chauvière

Wilfried Souleyreau

Marie-Alix Derieppe

...

2022/10/12

VirHunter: A Deep Learning-Based Method for Detection of Novel RNA Viruses in Plant Sequencing Data

Frontiers in Bioinformatics

Grigorii Sukhorukov

Maryam Khalili

Olivier Gascuel

Candresse Thierry

Armelle Marais-Colombel

...

2022

P02. 07 Innate immunity atlas of hepatocellular carcinoma unravels the differentiation hierarchy of myeloid NK cells and MDSCs

J Giraud

D Chalopin

E Ramel

M Derieppe

T Boyer

...

2022/9/1

P02. 08 The role of the inflammasome in the spatiotemporal evolution of the immune cell landscape in post-resection glioblastoma

S Lillo

D Chalopin

M Derieppe

J Martineau

J Giraud

...

2022/9/1

See List of Professors in Macha Nikolski University(Université de Bordeaux)