Kutlu O. Ulgen

Kutlu O. Ulgen

Bogaziçi Üniversitesi

H-index: 26

Asia-Turkey

About Kutlu O. Ulgen

Kutlu O. Ulgen, With an exceptional h-index of 26 and a recent h-index of 15 (since 2020), a distinguished researcher at Bogaziçi Üniversitesi, specializes in the field of Bioinformatics, biotechnology, life sciences.

His recent articles reflect a diverse array of research interests and contributions to the field:

Uncovering the Effect of SARS-CoV-2 on Liver Metabolism via Genome-Scale Metabolic Modeling for Reprogramming and Therapeutic Strategies

Exploring data‐driven chemical SMILES tokenization approaches to identify key protein–ligand binding moieties

Comprehensive genome-scale metabolic model of the human pathogen Cryptococcus neoformans: A platform for understanding pathogen metabolism and …

Identification of Therapeutic Targets for Medulloblastoma by Tissue-Specific Genome-Scale Metabolic Model

Circadian clock crosstalks with autism

Understanding the ADHD-Gut Axis by Metabolic Network Analysis

Neuroinflammation, energy and sphingolipid metabolism biomarkers are revealed by metabolic modeling of autistic brains

Exploiting pretrained biochemical language models for targeted drug design

Kutlu O. Ulgen Information

University

Position

Professor of Chemical Engineering

Citations(all)

3657

Citations(since 2020)

1313

Cited By

2879

hIndex(all)

26

hIndex(since 2020)

15

i10Index(all)

56

i10Index(since 2020)

23

Email

University Profile Page

Bogaziçi Üniversitesi

Google Scholar

View Google Scholar Profile

Kutlu O. Ulgen Skills & Research Interests

Bioinformatics

biotechnology

life sciences

Top articles of Kutlu O. Ulgen

Title

Journal

Author(s)

Publication Date

Uncovering the Effect of SARS-CoV-2 on Liver Metabolism via Genome-Scale Metabolic Modeling for Reprogramming and Therapeutic Strategies

ACS omega

Mustafa Sertbas

Kutlu O Ulgen

2024/3/22

Exploring data‐driven chemical SMILES tokenization approaches to identify key protein–ligand binding moieties

Molecular Informatics

Asu Busra Temizer

Gökçe Uludoğan

Rıza Özçelik

Taha Koulani

Elif Ozkirimli

...

2024/1/9

Comprehensive genome-scale metabolic model of the human pathogen Cryptococcus neoformans: A platform for understanding pathogen metabolism and …

Frontiers in Bioinformatics

Enes Fahri Tezcan

Yigit Demirtas

Zeynep Petek Cakar

Kutlu O Ulgen

2023/1/13

Identification of Therapeutic Targets for Medulloblastoma by Tissue-Specific Genome-Scale Metabolic Model

Molecules

Ilkay Irem Ozbek

Kutlu O Ulgen

2023/1/12

Circadian clock crosstalks with autism

Brain and Behavior

Ekin Yurdakul

Yaman Barlas

Kutlu O Ulgen

2023/12

Understanding the ADHD-Gut Axis by Metabolic Network Analysis

metabolites

Ezgi Tas

Kutlu O. Ulgen

2023/4/26

Neuroinflammation, energy and sphingolipid metabolism biomarkers are revealed by metabolic modeling of autistic brains

Biomedicines

Elif Esvap

Kutlu O Ulgen

2023/2/16

Exploiting pretrained biochemical language models for targeted drug design

Bioinformatics

Gökçe Uludoğan

Elif Ozkirimli

Kutlu O Ulgen

Nilgün Karalı

Arzucan Özgür

2022/9/1

Understanding the adaptive laboratory evolution of multiple stress‐resistant yeast strains by genome‐scale modeling

Yeast

Handan Çetin

Zeynep Petek Çakar

Kutlu O Ülgen

2022/8

Understanding the Link between Inflammasome and Apoptosis through the Response of THP-1 Cells against Drugs Using Droplet-Based Microfluidics

ACS Omega

Elif Gencturk

Muge Kasim

Berna Morova

Alper Kiraz

Kutlu O Ulgen

2022/5/2

Interpreting Chemical Words of a Data-driven Segmentation Method as Protein Family Pharmacophores and Functional Groups

Molecular Informatics

Asu Busra Temizer

Gökçe Uludoğan

Rıza Özçelik

Taha Koulani

Elif Ozkirimli

...

2024/1/9

Carvacrol Enhances the Antimicrobial Potency of Berberine in Bacillus subtilis

Current Microbiology

Basak Atas

Cemile Selin Aksoy

Fatma Gizem Avci

Nihat Alpagu Sayar

Kutlu Ulgen

...

2022/5

Exploring Data-Driven Chemical SMILES Tokenization Approaches to Identify Key Protein-Ligand Binding Moieties

arXiv e-prints

Asu Büşra Temizer

Gökçe Uludoğan

Rıza Özçelik

Taha Koulani

Elif Ozkirimli

...

2022/10

Fabrication Protocol for Thermoplastic Microfluidic Devices: Nanoliter Volume Bioreactors for Cell Culturing

Elif Gencturk

Senol Mutlu

Kutlu O Ulgen

2021/4/27

Understanding HMF inhibition on yeast growth coupled with ethanol production for the improvement of bio-based industrial processes

Process Biochemistry

Elif Gencturk

Kutlu O Ulgen

2022/10/1

Real-Time Single-Cell Monitoring of Drug Effects Using Droplet-Based Microfluidic Technology: A Proof-of-Concept Study

Omics: a journal of integrative biology

Muge Kasim

Elif Gencturk

Kutlu O Ulgen

2021/10/1

Live Cell Imaging of Peptide Uptake Using a Microfluidic Platform

International Journal of Peptide Research and Therapeutics

Merve Yuce

Elif Ozkirimli

Berna Sariyar Akbulut

Kutlu Ulgen

2021/9

Advances in genome-scale metabolic modeling toward microbial community analysis of the human microbiome

Elif Esvap

Kutlu O Ulgen

2021/8/17

Thermoplastic microfluidic bioreactors with integrated electrodes to study tumor treating fields on yeast cells

Biomicrofluidics

Elif Gencturk

Kutlu O Ulgen

Senol Mutlu

2020/5/1

Cell trapping microfluidic chip made of Cyclo olefin polymer enabling two concurrent cell biology experiments with long term durability

Biomedical Microdevices

Elif Gencturk

Ekin Yurdakul

Ahmet Yasin Celik

Senol Mutlu

Kutlu O Ulgen

2020/3

See List of Professors in Kutlu O. Ulgen University(Bogaziçi Üniversitesi)

Co-Authors

H-index: 93
S.G. Oliver

S.G. Oliver

University of Cambridge

H-index: 31
Kazim Yalcin Arga

Kazim Yalcin Arga

Marmara Üniversitesi

H-index: 28
Mehmet Mete Altintas

Mehmet Mete Altintas

Rush University

H-index: 28
Belma ÖZBEK

Belma ÖZBEK

Yildiz Teknik Üniversitesi

H-index: 5
Elif Gençtürk

Elif Gençtürk

Bogaziçi Üniversitesi

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