Klaas Vandepoele

Klaas Vandepoele

Universiteit Gent

H-index: 69

Europe-Belgium

About Klaas Vandepoele

Klaas Vandepoele, With an exceptional h-index of 69 and a recent h-index of 49 (since 2020), a distinguished researcher at Universiteit Gent, specializes in the field of comparative genomics, systems biology, genomics, biological networks, plants.

His recent articles reflect a diverse array of research interests and contributions to the field:

Transcriptional chronology reveals conserved genes involved in pennate diatom sexual reproduction

Molecular fingerprints of cell size sensing and mating type differentiation in pennate diatoms

MINI‐AC: inference of plant gene regulatory networks using bulk or single‐cell accessible chromatin profiles

Charting plant gene functions in the multi-omics and single-cell era

Diatom adhesive trail proteins acquired by horizontal gene transfer from bacteria serve as primers for marine biofilm formation

MINI-EX version 2: cell-type-specific gene regulatory network inference using an integrative single-cell transcriptomics approach

Prediction of Transcription Factor Regulators and Gene Regulatory Networks in Tomato Using Binding Site Information

Characterization of Gene Regulatory Networks in Plants Using New Methods and Data Types

Klaas Vandepoele Information

University

Position

Full Professor - VIB group leader

Citations(all)

23820

Citations(since 2020)

11207

Cited By

17251

hIndex(all)

69

hIndex(since 2020)

49

i10Index(all)

132

i10Index(since 2020)

120

Email

University Profile Page

Universiteit Gent

Google Scholar

View Google Scholar Profile

Klaas Vandepoele Skills & Research Interests

comparative genomics

systems biology

genomics

biological networks

plants

Top articles of Klaas Vandepoele

Title

Journal

Author(s)

Publication Date

Transcriptional chronology reveals conserved genes involved in pennate diatom sexual reproduction

Molecular Ecology

Sien Audoor

Gust Bilcke

Katerina Pargana

Darja Belišová

Sander Thierens

...

2024/4/1

Molecular fingerprints of cell size sensing and mating type differentiation in pennate diatoms

bioRxiv

Darja Belisova

Gust Bilcke

Sien Audoor

Sofie D'hondt

Lieven De Veylder

...

2024

MINI‐AC: inference of plant gene regulatory networks using bulk or single‐cell accessible chromatin profiles

The Plant Journal

Nicolás Manosalva Pérez

Camilla Ferrari

Julia Engelhorn

Thomas Depuydt

Hilde Nelissen

...

2024/1

Charting plant gene functions in the multi-omics and single-cell era

Thomas Depuydt

Bert De Rybel

Klaas Vandepoele

2023/3/1

Diatom adhesive trail proteins acquired by horizontal gene transfer from bacteria serve as primers for marine biofilm formation

New Phytologist

Jirina Zackova Suchanova

Gust Bilcke

Beata Romanowska

Ali Fatlawi

Martin Pippel

...

2023/10

MINI-EX version 2: cell-type-specific gene regulatory network inference using an integrative single-cell transcriptomics approach

bioRxiv

Jasper Staut

Nicolas Manosalva Perez

Thomas Depuydt

Klaas Vandepoele

Svitlana Lukicheva

2023

Prediction of Transcription Factor Regulators and Gene Regulatory Networks in Tomato Using Binding Site Information

Nicolás Manosalva Pérez

Klaas Vandepoele

2023/9/9

Characterization of Gene Regulatory Networks in Plants Using New Methods and Data Types

Klaas Vandepoele

Kerstin Kaufmann

2023/9/9

Distinctive and complementary roles of E2F transcription factors during plant replication stress responses

Molecular Plant

Maherun Nisa

Thomas Eekhout

Clara Bergis

Jose-Antonio Pedroza-Garcia

Xiaoning He

...

2023/8/7

Transcription factors KANADI 1, MYB DOMAIN PROTEIN 44, and PHYTOCHROME INTERACTING FACTOR 4 regulate long intergenic noncoding RNAs expressed in Arabidopsis roots

Plant Physiology

Li Liu

Michel Heidecker

Thomas Depuydt

Nicolas Manosalva Perez

Martin Crespi

...

2023/6/22

Dicer-like 3a mediates intergenerational resistance against root-knot nematodes in rice via hormone responses

Plant Physiology

Anikó Meijer

Mohammad Reza Atighi

Kristof Demeestere

Tim De Meyer

Klaas Vandepoele

...

2023/11

Rhizogenic Agrobacterium protein RolB interacts with the TOPLESS repressor proteins to reprogram plant immunity and development

Proceedings of the National Academy of Sciences of the USA

Lore Gryffroy

Evi Ceulemans

Nicolás Manosalva Pérez

Jhon Jairo Venegas Molina

Ana Cristina Jaramillo-Madrid

...

2022

MINI-EX: Integrative inference of single-cell gene regulatory networks in plants

Molecular Plant

Camilla Ferrari

Nicolás Manosalva Pérez

Klaas Vandepoele

2022/11/7

Identification of growth regulators using cross-species network analysis in plants

Plant Physiology

Pasquale Luca Curci

Jie Zhang

Niklas Mähler

Carolin Seyfferth

Chanaka Mannapperuma

...

2022/12/1

The Quest for Orthologs orthology benchmark service in 2022

Nucleic Acids Research

Yannis Nevers

Tamsin EM Jones

Dushyanth Jyothi

Bethan Yates

Meritxell Ferret

...

2022/7/5

Chromosome-scale assembly and annotation of the perennial ryegrass genome

BMC genomics

Istvan Nagy

Elisabeth Veeckman

Chang Liu

Michiel Van Bel

Klaas Vandepoele

...

2022/7/12

JASPAR 2022: the 9th release of the open-access database of transcription factor binding profiles

Nucleic acids research

Jaime A Castro-Mondragon

Rafael Riudavets-Puig

Ieva Rauluseviciute

Roza Berhanu Lemma

Laura Turchi

...

2022/1/7

Spatiotemporal expression profile of novel and known small RNAs throughout rice plant development focussing on seed tissues

BMC genomics

Anikó Meijer

Tim De Meyer

Klaas Vandepoele

Tina Kyndt

2022/12

PLAZA 5.0: extending the scope and power of comparative and functional genomics in plants

Nucleic Acids Research

Michiel Van Bel

Francesca Silvestri

Eric M Weitz

Lukasz Kreft

Alexander Botzki

...

2022/1/7

Plant Lineage-Specific PIKMIN1 Drives APC/CCCS52A2 E3-Ligase Activity-Dependent Cell Division

Plant Physiology

Alex Willems

Yuanke Liang

Jefri Heyman

Thomas Depuydt

Thomas Eekhout

...

2022/11/24

See List of Professors in Klaas Vandepoele University(Universiteit Gent)

Co-Authors

H-index: 172
Dirk Inze

Dirk Inze

Universiteit Gent

H-index: 136
Yves Van de Peer

Yves Van de Peer

Universiteit Gent

H-index: 75
Vyverman Wim

Vyverman Wim

Universiteit Gent

H-index: 61
Pierre Rouzé

Pierre Rouzé

Universiteit Gent

H-index: 31
Anthony Mathelier

Anthony Mathelier

Universitetet i Oslo

H-index: 28
Jelle Van Leene

Jelle Van Leene

Universiteit Gent

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