Karthik Shekhar

Karthik Shekhar

University of California, Berkeley

H-index: 29

North America-United States

About Karthik Shekhar

Karthik Shekhar, With an exceptional h-index of 29 and a recent h-index of 29 (since 2020), a distinguished researcher at University of California, Berkeley, specializes in the field of single cell RNA-seq, Computational Immunology, statistical physics, machine learning, neuroscience.

His recent articles reflect a diverse array of research interests and contributions to the field:

Ancient origin of the rod bipolar cell pathway in the vertebrate retina

Method of treating autoimmune disease with lymphocyte antigen CD5-like (CD5L) protein

The ChAHP chromatin remodelling complex regulates neurodevelopmental disorder risk genes to scale the production of neocortical layers

Vision-dependent and-independent molecular maturation of mouse retinal ganglion cells

Evolution of neuronal cell classes and types in the vertebrate retina

Integrated multi-omics single cell atlas of the human retina

Comprehensive Spatial Transcriptomic Analysis of Mouse Retinal Ganglion Cell Diversity

Temporal single-cell atlas of non-neuronal retinal cells reveals dynamic, coordinated multicellular responses to central nervous system injury

Karthik Shekhar Information

University

Position

___

Citations(all)

17342

Citations(since 2020)

13773

Cited By

9375

hIndex(all)

29

hIndex(since 2020)

29

i10Index(all)

33

i10Index(since 2020)

33

Email

University Profile Page

University of California, Berkeley

Google Scholar

View Google Scholar Profile

Karthik Shekhar Skills & Research Interests

single cell RNA-seq

Computational Immunology

statistical physics

machine learning

neuroscience

Top articles of Karthik Shekhar

Title

Journal

Author(s)

Publication Date

Ancient origin of the rod bipolar cell pathway in the vertebrate retina

bioRxiv

Ayana M Hellevik

Philip Mardoum

Joshua Hahn

Yvonne Kölsch

Florence D D’Orazi

...

2023/9/13

Method of treating autoimmune disease with lymphocyte antigen CD5-like (CD5L) protein

2024/1/30

The ChAHP chromatin remodelling complex regulates neurodevelopmental disorder risk genes to scale the production of neocortical layers

bioRxiv

Samuel Clemot-Dupont

Jose Alex Laurenco Fernandes

Sarah Larrigan

Xiaoqi Sun

Suma Medisetti

...

2024

Vision-dependent and-independent molecular maturation of mouse retinal ganglion cells

Neuroscience

Irene E Whitney

Salwan Butrus

Michael A Dyer

Fred Rieke

Joshua R Sanes

...

2023/1/1

Evolution of neuronal cell classes and types in the vertebrate retina

Nature

Joshua Hahn

Aboozar Monavarfeshani

Mu Qiao

Allison H Kao

Yvonne Kölsch

...

2023/12/14

Integrated multi-omics single cell atlas of the human retina

Research Square

Jin Li

Jun Wang

Ignacio L Ibarra

Xuesen Cheng

Malte D Luecken

...

2023/11/8

Comprehensive Spatial Transcriptomic Analysis of Mouse Retinal Ganglion Cell Diversity

Investigative Ophthalmology & Visual Science

Nicole Tsai

Kushal Nimkar

Karthik Shekhar

Xin Duan

2023/6/1

Temporal single-cell atlas of non-neuronal retinal cells reveals dynamic, coordinated multicellular responses to central nervous system injury

Nature immunology

Inbal Benhar

Jiarui Ding

Wenjun Yan

Irene E Whitney

Anne Jacobi

...

2023/4

Defining Selective Neuronal Resilience and Identifying Targets of Neuroprotection and Axon Regeneration Using Single-Cell RNA Sequencing: Computational Approaches

Anne Jacobi

Nicholas M Tran

2023/3/8

Vision sculpts a continuum of L2/3 cell types in the visual cortex during the critical period

bioRxiv

Fangming Xie

Saumya Jain

Salwan Butrus

Karthik Shekhar

S Lawrence Zipursky

2023/12/18

Vision-dependent specification of cell types and function in the developing cortex

Cell

Sarah Cheng

Salwan Butrus

Liming Tan

Runzhe Xu

Srikant Sagireddy

...

2022/1/20

Method for determination and identification of cell signatures and cell markers

2022/1/18

Unified classification of mouse retinal ganglion cells using function, morphology, and gene expression

Cell reports

Jillian Goetz

Zachary F Jessen

Anne Jacobi

Adam Mani

Sam Cooler

...

2022/7/12

Vision is required for cell type specification and function in the developing visual cortex

Investigative Ophthalmology & Visual Science

Sarah Cheng

Salwan Brutus

Liming Tan

Runzhe Xu

Srikant Sagireddy

...

2022/6/1

Solving neurodegeneration: common mechanisms and strategies for new treatments

Lauren K Wareham

Shane A Liddelow

Sally Temple

Larry I Benowitz

Adriana Di Polo

...

2022/3/21

Diversification of multipotential postmitotic mouse retinal ganglion cell precursors into discrete types

Elife

Karthik Shekhar

Irene E Whitney

Salwan Butrus

Yi-Rong Peng

Joshua R Sanes

2022/2/22

Dietary suppression of MHC class II expression in intestinal epithelial cells enhances intestinal tumorigenesis

Cell stem cell

Semir Beyaz

Charlie Chung

Haiwei Mou

Khristian E Bauer-Rowe

Michael E Xifaras

...

2021/11/4

Generating and using transcriptomically based retinal cell atlases

Karthik Shekhar

Joshua R Sanes

2021/9/15

Molecular classification of zebrafish retinal ganglion cells links genes to cell types to behavior

Neuron

Yvonne Kölsch

Joshua Hahn

Anna Sappington

Manuel Stemmer

António M Fernandes

...

2021/2/17

Cell atlas of aqueous humor outflow pathways in eyes of humans and four model species provides insight into glaucoma pathogenesis

Proceedings of the National Academy of Sciences

Tavé van Zyl

Wenjun Yan

Alexi McAdams

Yi-Rong Peng

Karthik Shekhar

...

2020/5/12

See List of Professors in Karthik Shekhar University(University of California, Berkeley)