Julio Collado-Vides
Universidad Nacional Autónoma de México
H-index: 62
Latin America-Mexico
Top articles of Julio Collado-Vides
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
Flexible gold standards for transcription factor regulatory interactions in Escherichia coli K-12: architecture of evidence types | Frontiers in Genetics | Paloma Lara Socorro Gama-Castro Heladia Salgado Claire Rioualen Víctor H Tierrafría | 2024/3/5 |
RegulonDB v12.0: a comprehensive resource of transcriptional regulation in E. coli K-12 | Nucleic Acids Research | Heladia Salgado Socorro Gama-Castro Paloma Lara Citlalli Mejia-Almonte Gabriel Alarcón-Carranza | 2024/1/5 |
A Gold Standard for Transcription Factor Regulatory Interactions inEscherichia coliK-12: Architecture of Evidence Types | P Lara S Gama-Castro H Salgado C Rioualen VH Tierrafría | 2023/2/26 | |
The EcoCyc Database (2023) | Peter D Karp Suzanne Paley Ron Caspi Anamika Kothari Markus Krummenacker | 2023/12/12 | |
Regulatory promoter architectures in the hands of thermodynamic modelling | Julio Collado-Vides | 2023/6 | |
RegulonDB 11.0: Comprehensive high-throughput datasets on transcriptional regulation in Escherichia coli K-12 | Microbial genomics | Víctor H Tierrafría Claire Rioualen Heladia Salgado Paloma Lara Socorro Gama-Castro | 2022/5/18 |
Missing links between gene function and physiology in genomics | Frontiers in Physiology | Julio Collado-Vides Pascale Gaudet Víctor de Lorenzo | 2022/2/28 |
Sensory systems and transcriptional regulation in Escherichia coli | Georgette Femerling Socorro Gama-Castro Paloma Lara Daniela Ledezma-Tejeida Víctor H Tierrafría | 2022/2/14 | |
The EcoCyc database in 2021 | Frontiers in microbiology | Ingrid M Keseler Socorro Gama-Castro Amanda Mackie Richard Billington César Bonavides-Martínez | 2021/7/28 |
Lisen&Curate: a platform to facilitate gathering textual evidence for curation of regulation of transcription initiation in bacteria | Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms | Martín Díaz-Rodríguez Oscar Lithgow-Serrano Francisco Guadarrama-García Víctor H Tierrafría Socorro Gama-Castro | 2021/11/1 |
PulmonDB: a curated lung disease gene expression database | Scientific reports | Ana B Villaseñor-Altamirano Marco Moretto Mariel Maldonado Alejandra Zayas-Del Moral Adrián Munguía-Reyes | 2020/1/16 |
Knowledge extraction for assisted curation of summaries of bacterial transcription factor properties | Database | Carlos-Francisco Méndez-Cruz Antonio Blanchet Alan Godínez Ignacio Arroyo-Fernández Socorro Gama-Castro | 2020/1/1 |
Redefining fundamental concepts of transcription initiation in bacteria | Citlalli Mejía-Almonte Stephen JW Busby Joseph T Wade Jacques van Helden Adam P Arkin | 2020/11 | |
A smart literature exploration environment for COVID-19 literature | Oscar William Lithgow-Serrano Alejandra Lopez-Fuentes Yalbi Balderas-Martinez Fabio Rinaldi Julio Collado-Vides | 2020/8/12 | |
Lisen&Curate: A platform to facilitate knowledge tools for curation of regulation of transcription initiation in bacteria | bioRxiv | Carlos-Francisco Méndez-Cruz Martín Díaz-Rodríguez Francisco Guadarrama-García Oscar Lithgow-Serrano Socorro Gama-Castro | 2020/4/29 |
L-Regulon: A novel “soft-curation” approach supported by a semantic enriched reading for RegulonDB literature | bioRxiv | Oscar Lithgow-Serrano Socorro Gama-Castro Cecilia Ishida-Gutiérrez Julio Collado-Vides | 2020/4/28 |
