Julian M Catchen

Julian M Catchen

University of Illinois at Urbana-Champaign

H-index: 36

North America-United States

About Julian M Catchen

Julian M Catchen, With an exceptional h-index of 36 and a recent h-index of 28 (since 2020), a distinguished researcher at University of Illinois at Urbana-Champaign, specializes in the field of Computational Biology, Population Genomics, Structural Variation.

His recent articles reflect a diverse array of research interests and contributions to the field:

Klumpy: A tool to evaluate the integrity of long-read genome assemblies and illusive sequence motifs

Genomic analysis supports Cape Lion population connectivity prior to colonial eradication and extinction

Highly resolved genome assembly and comparative transcriptome profiling reveal genes related to developmental stages of tapeworm Ligula intestinalis

Ongoing introgression of a secondary sexual plumage trait in a stable avian hybrid zone

Genomics of secondarily temperate adaptation in the only non-Antarctic icefish

Single-cell dissection of aggression in honeybee colonies

Numt Parser: Automated identification and removal of nuclear mitochondrial pseudogenes (numts) for accurate mitochondrial genome reconstruction in Panthera

On the causes, consequences, and avoidance of PCR duplicates: Towards a theory of library complexity

Julian M Catchen Information

University

Position

___

Citations(all)

15241

Citations(since 2020)

8690

Cited By

10269

hIndex(all)

36

hIndex(since 2020)

28

i10Index(all)

50

i10Index(since 2020)

43

Email

University Profile Page

University of Illinois at Urbana-Champaign

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View Google Scholar Profile

Julian M Catchen Skills & Research Interests

Computational Biology

Population Genomics

Structural Variation

Top articles of Julian M Catchen

Title

Journal

Author(s)

Publication Date

Klumpy: A tool to evaluate the integrity of long-read genome assemblies and illusive sequence motifs

bioRxiv

Giovanni Madrigal

Bushra Fazal Minhas

Julian M Catchen

2024

Genomic analysis supports Cape Lion population connectivity prior to colonial eradication and extinction

Journal of Heredity

Alida de Flamingh

Thomas P Gnoske

Angel G Rivera-Colón

Velizar A Simeonovski

Julian C Kerbis Peterhans

...

2024/3/1

Highly resolved genome assembly and comparative transcriptome profiling reveal genes related to developmental stages of tapeworm Ligula intestinalis

Proceedings of the Royal Society B

Masoud Nazarizadeh

Milena Nováková

Marie Drábková

Julian Catchen

Peter D Olson

...

2024/1/31

Ongoing introgression of a secondary sexual plumage trait in a stable avian hybrid zone

bioRxiv

Kira M Long

Angel G Rivera-Colón

Kevin FP Bennett

Julian M Catchen

Michael J Braun

...

2023

Genomics of secondarily temperate adaptation in the only non-Antarctic icefish

Molecular biology and evolution

Angel G Rivera-Colón

Niraj Rayamajhi

Bushra Fazal Minhas

Giovanni Madrigal

Kevin T Bilyk

...

2023/3/1

Single-cell dissection of aggression in honeybee colonies

Nature Ecology & Evolution

Ian M Traniello

Syed Abbas Bukhari

Payam Dibaeinia

Guillermo Serrano

Arian Avalos

...

2023/8

Numt Parser: Automated identification and removal of nuclear mitochondrial pseudogenes (numts) for accurate mitochondrial genome reconstruction in Panthera

Journal of Heredity

Alida de Flamingh

Angel G Rivera-Colón

Tom P Gnoske

Julian C Kerbis Peterhans

Julian Catchen

...

2023/3/1

On the causes, consequences, and avoidance of PCR duplicates: Towards a theory of library complexity

Molecular ecology resources

Nicolas C Rochette

Angel G Rivera‐Colón

Jessica Walsh

Thomas J Sanger

Shane C Campbell‐Staton

...

2023/8

Chromosome-Level Genome Assembly and Circadian Gene Repertoire of the Patagonia Blennie Eleginops maclovinus—The Closest Ancestral Proxy of Antarctic …

Genes

Chi-Hing Christina Cheng

Angel G Rivera-Colón

Bushra Fazal Minhas

Loralee Wilson

Niraj Rayamajhi

...

2023/5/30

Novel mitochondrial genome rearrangements including duplications and extensive heteroplasmy could underlie temperature adaptations in Antarctic notothenioid fishes

Scientific reports

Bushra Fazal Minhas

Emily A Beck

C-H Christina Cheng

Julian Catchen

2023/4/28

Leafy and weedy seadragon genomes connect genic and repetitive DNA features to the extravagant biology of syngnathid fishes

Proceedings of the National Academy of Sciences

Clayton M Small

Hope M Healey

Mark C Currey

Emily A Beck

Julian Catchen

...

2022/6/28

Population genomics analysis with RAD, reprised: Stacks 2

Angel G Rivera-Colón

Julian Catchen

2021/11/4

Single-cell dissection of a collective behaviour in honeybees

bioRxiv

Ian M Traniello

Syed Abbas Bukhari

Payam Dibaeinia

Guillermo Serrano

Arian Avalos

...

2022/3/30

Evaluating the genome-wide impacts of species translocations: the greater prairie-chicken as a case study

Conservation Genetics

S.L.R. Capel

J.L. Bouzat

J.M. Catchen

J.A. Johnson

P.O. Dunn

...

2021

Evaluating Illumina-, Nanopore-, and PacBio-based genome assembly strategies with the bald notothen, Trematomus borchgrevinki

G3

Niraj Rayamajhi

Chi-Hing Christina Cheng

Julian M Catchen

2022/11/1

The genomic basis of the plant island syndrome in Darwin’s giant daisies

Nature communications

José Cerca

Bent Petersen

José Miguel Lazaro-Guevara

Angel Rivera-Colón

Siri Birkeland

...

2022/6/28

Removing the bad apples: A simple bioinformatic method to improve loci‐recovery in de novo RADseq data for non‐model organisms

Methods in Ecology and Evolution

José Cerca

Marius F Maurstad

Nicolas C Rochette

Angel G Rivera‐Colón

Niraj Rayamajhi

...

2021/5

The developmental and genetic architecture of the sexually selected male ornament of swordtails

Current Biology

Manfred Schartl

Susanne Kneitz

Jenny Ormanns

Cornelia Schmidt

Jennifer L Anderson

...

2021/3/8

Incomplete lineage sorting and ancient admixture, and speciation without morphological change in ghost-worm cryptic species

PeerJ

José Cerca

Angel G Rivera-Colón

Mafalda S Ferreira

Mark Ravinet

Michael D Nowak

...

2021/2/9

Simulation with RADinitio improves RADseq experimental design and sheds light on sources of missing data

Molecular ecology resources

Angel G Rivera‐Colón

Nicolas C Rochette

Julian M Catchen

2021/2

See List of Professors in Julian M Catchen University(University of Illinois at Urbana-Champaign)

Co-Authors

H-index: 99
John Postlethwait

John Postlethwait

University of Oregon

H-index: 48
Paul Hohenlohe

Paul Hohenlohe

University of Idaho

H-index: 42
William Cresko

William Cresko

University of Oregon

H-index: 41
Ingo Braasch

Ingo Braasch

Michigan State University

H-index: 28
Cristian Cañestro

Cristian Cañestro

Universidad de Barcelona

H-index: 21
John Conery

John Conery

University of Oregon

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