Juho Rousu
Aalto-yliopisto
H-index: 34
Europe-Finland
Top articles of Juho Rousu
Title | Journal | Author(s) | Publication Date |
|---|---|---|---|
Predicting drug combination response surfaces | bioRxiv | Riikka Huusari Tianduanyi Wang Sandor Szedmak Tero Aittokallio Juho Rousu | 2024 |
Learning symmetry-aware atom mapping in chemical reactions through deep graph matching | Journal of Cheminformatics | Maryam Astero Juho Rousu | 2024/4/22 |
Protein Function Prediction Through Multi-view Multi-label Latent Tensor Reconstruction | Robert Ebo Armah-Sekum Sandor Szedmak Juho Rousu | 2024/2/26 | |
Data‐Driven Compound Identification in Atmospheric Mass Spectrometry | Advanced Science | Hilda Sandström Matti Rissanen Juho Rousu Patrick Rinke | 2024/2 |
Scalable variable selection for two-view learning tasks with projection operators | Machine Learning | Sandor Szedmak Riikka Huusari Tat Hong Duong Le Juho Rousu | 2023/12/22 |
Vector-valued least-squares regression under output regularity assumptions | Journal of Machine Learning Research | Luc Brogat-Motte Alessandro Rudi Céline Brouard Juho Rousu Florence d'Alché-Buc | 2022 |
Systematic review of computational methods for drug combination prediction | Weikaixin Kong Gianmarco Midena Yingjia Chen Paschalis Athanasiadis Tianduanyi Wang | 2022/1/1 | |
Joint structural annotation of small molecules using liquid chromatography retention order and tandem mass spectrometry data | Nature Machine Intelligence | Eric Bach Emma L Schymanski Juho Rousu | 2022/12 |
Learning to predict graphs with fused Gromov-Wasserstein barycenters | Luc Brogat-Motte Rémi Flamary Céline Brouard Juho Rousu Florence d’Alché-Buc | 2022/6/28 | |
Strain design optimization using reinforcement learning | PLoS computational biology | Maryam Sabzevari Sandor Szedmak Merja Penttilä Paula Jouhten Juho Rousu | 2022/6/3 |
Systematic classification of unknown metabolites using high-resolution fragmentation mass spectra | Nature biotechnology | Kai Dührkop Louis-Félix Nothias Markus Fleischauer Raphael Reher Marcus Ludwig | 2021/4 |
Learning primal-dual sparse kernel machines | arXiv preprint arXiv:2108.12199 | Riikka Huusari Sahely Bhadra Cécile Capponi Hachem Kadri Juho Rousu | 2021/8/27 |
Modeling drug combination effects via latent tensor reconstruction | Bioinformatics | Tianduanyi Wang Sandor Szedmak Haishan Wang Tero Aittokallio Tapio Pahikkala | 2021/7/12 |
Probabilistic framework for integration of mass spectrum and retention time information in small molecule identification | Bioinformatics | Eric Bach Simon Rogers John Williamson Juho Rousu | 2021/6/15 |
Ranking microbial metabolomic and genomic links in the NPLinker framework using complementary scoring functions | PLoS computational biology | Grimur Hjoerleifsson Eldjarn Andrew Ramsay Justin JJ Van Der Hooft Katherine R Duncan Sylvia Soldatou | 2021/5/4 |
Systematic mapping of cancer cell target dependencies using high-throughput drug screening in triple-negative breast cancer | Computational and Structural Biotechnology Journal | Tianduanyi Wang Prson Gautam Juho Rousu Tero Aittokallio | 2020/1/1 |
Leveraging multi-way interactions for systematic prediction of pre-clinical drug combination effects | Nature communications | Heli Julkunen Anna Cichonska Prson Gautam Sandor Szedmak Jane Douat | 2020/12/1 |
Substrate specificity of 2-deoxy-D-ribose 5-phosphate aldolase (DERA) assessed by different protein engineering and machine learning methods | Applied Microbiology and Biotechnology | Sanni Voutilainen Markus Heinonen Martina Andberg Emmi Jokinen Hannu Maaheimo | 2020/12 |
Learning output embeddings in structured prediction | arXiv preprint arXiv:2007.14703 | Luc Brogat-Motte Alessandro Rudi Céline Brouard Juho Rousu Florence d'Alché-Buc | 2020/7/29 |
A solution for large scale nonlinear regression with high rank and degree at constant memory complexity via latent tensor reconstruction | arXiv preprint arXiv:2005.01538 | Sandor Szedmak Anna Cichonska Heli Julkunen Tapio Pahikkala Juho Rousu | 2020/5/4 |
Co-Authors
